Os04g0525100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os04g0525100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193.88 | 0.654 | 7.31 | -1.04 | 0.945 | 2.49 | 1.8 | -4.32 | 0.168 | 10.1 | 19.3 | 2063 | 6.06 | -- |
| 220.02 | 0.691 | 7.2 | -0.576 | 0.653 | 3.35 | 2.29 | -- | 0.279 | 12.3 | 19.24 | 2264 | 7 | -- |
| 203.11 | 0.664 | 7.32 | -1 | 1.03 | 2.31 | -- | -4.82 | 0.18 | 9.31 | 19.41 | 2078 | 6.31 | -- |
| 233.64 | 0.712 | 7.21 | -0.531 | 0.58 | 3.19 | -- | -- | 0.264 | 9.13 | 19 | 2406 | 6.4 | -- |
| 248.68 | 0.734 | 7.26 | -0.41 | -- | 2.42 | -- | -3.63 | 0.32 | -- | 19.7 | 929 | 6.02 | -- |
| 400.38 | 0.938 | 7.02 | 1.07 | 1.44 | -- | -0.382 | -- | 0.965 | 7.14 | -- | -- | -- | -- |
| 400.59 | 0.937 | 7.02 | 1.07 | 1.44 | -- | -- | -- | 0.967 | 7.28 | -- | -- | -- | -- |
| 248.9 | 0.735 | 7.22 | -0.602 | -- | 3.48 | -- | -- | 0.225 | -- | 18.9 | 2341 | 5.66 | -- |
| 234.84 | 0.714 | 7.17 | -- | 0.785 | 2.75 | -- | -- | 0.389 | 7.34 | 19.18 | 2463 | 6.08 | -- |
| 510.58 | 1.06 | 7.05 | 1.09 | -- | -- | -- | -- | 0.991 | -- | -- | -- | -- | -- |
| 430.54 | 0.971 | 7.05 | -- | 1.45 | -- | -- | -- | 0.848 | 7.23 | -- | -- | -- | -- |
| 253.38 | 0.741 | 7.16 | -- | -- | 3.25 | -- | -- | 0.409 | -- | 18.97 | 2210 | 4.6 | -- |
| 541.99 | 1.09 | 7.08 | -- | -- | -- | -- | -- | 0.87 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 203.63 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 2 |
| 3 | 204.86 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 2 |
| 7 | 208.16 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 17 | 212.62 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 29 | 215.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 31 | 215.43 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 61 | 217.15 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 80 | 218.24 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 85 | 218.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 91 | 218.69 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 116 | 219.95 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 122 | 220.21 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 17 |
| 189 | 223.87 | radiation | 20 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 286 | 228.38 | radiation | 20 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 300 | 228.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 6 |
| 318 | 229.69 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 334 | 230.29 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 4 |
| 335 | 230.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 339 | 230.35 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 442 | 232.77 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 15 |
| 471 | 233.26 | radiation | 20 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 514 | 233.93 | radiation | 10 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 530 | 234.17 | humidity | 90 | 14400 | > th | dose dependent | sin | 6 | NA |
| 582 | 235.02 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 601 | 235.45 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 621 | 235.67 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 625 | 235.70 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 686 | 236.56 | radiation | 20 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 691 | 236.66 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 692 | 236.67 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 705 | 236.82 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 707 | 236.85 | humidity | 60 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 725 | 237.07 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 766 | 237.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 775 | 237.71 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 15 |
| 830 | 238.34 | humidity | 60 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 866 | 238.75 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 18 |
| 913 | 239.31 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 916 | 239.35 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 4 |
| 939 | 239.55 | humidity | 70 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 954 | 239.67 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 13 |