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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0521100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Major intrinsic protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.36 (0.0261) R2 : 0.000332
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0214 (0.0549) R2dN8 : 0.000428 R2N8 : 0.000332
σ : 0.491
deviance : 110.85
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
100.03 0.47 3.41 0.305 0.32 0.36 -0.486 1.23 -0.154 6.38 84.47 5884 -- --
102.78 0.472 3.39 0.162 0.323 0.363 -0.494 -- -0.18 6.37 85 6994 -- --
100.56 0.467 3.41 0.301 0.324 0.36 -- 1.24 -0.154 6.48 84.73 5938 -- --
103.31 0.473 3.39 0.125 0.311 0.342 -- -- -0.17 6.68 85.59 7223 -- --
105.65 0.479 3.41 0.311 -- 0.39 -- 1.27 -0.155 -- 84.05 5688 -- --
105.04 0.48 3.35 0.0704 0.313 -- -0.508 -- -0.0216 6.41 -- -- -- --
105.65 0.481 3.35 0.0645 0.311 -- -- -- -0.0196 6.67 -- -- -- --
108.21 0.484 3.39 0.153 -- 0.376 -- -- -0.163 -- 87 6988 -- --
103.71 0.474 3.39 -- 0.312 0.314 -- -- -0.171 6.66 85.71 7221 -- --
110.71 0.492 3.36 0.0718 -- -- -- -- -0.0134 -- -- -- -- --
105.76 0.481 3.35 -- 0.312 -- -- -- -0.0268 6.65 -- -- -- --
108.73 0.486 3.39 -- -- 0.327 -- -- -0.169 -- 85.36 6984 -- --
110.85 0.491 3.36 -- -- -- -- -- -0.0214 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 92.70 radiation 1.0 43200 < th dose dependent rect. 3 1
2 92.73 atmosphere 1005.0 90 > th dose dependent rect. 2 1
3 92.83 temperature 25.0 90 > th dose dependent rect. 1 3
4 92.91 atmosphere 1000.0 30 > th dose independent rect. 3 23
6 92.95 radiation 1.0 4320 < th dose dependent rect. 3 1
18 93.07 wind 9.0 1440 < th dose independent rect. 3 1
19 93.07 temperature 10.0 1440 > th dose independent rect. 3 1
22 93.07 temperature 30.0 1440 < th dose independent rect. 3 1
26 93.07 humidity 50.0 1440 > th dose independent rect. 3 1
35 93.07 atmosphere 995.0 1440 > th dose independent rect. 3 1
36 93.07 radiation 1.0 1440 < th dose independent rect. 3 1
56 93.07 temperature 10.0 1440 > th dose independent rect. 4 23
66 93.12 temperature 25.0 90 > th dose independent rect. 1 1
72 93.26 atmosphere 1005.0 30 > th dose independent rect. 2 1
73 93.28 wind 3.0 30 < th dose independent rect. 2 1
78 93.30 wind 3.0 30 < th dose dependent rect. 2 1
89 93.38 temperature 10.0 30 > th dose independent rect. 2 1
91 93.38 temperature 30.0 30 < th dose independent rect. 2 1
92 93.38 humidity 50.0 30 > th dose independent rect. 2 1
95 93.38 humidity 90.0 30 > th dose independent rect. 2 1
97 93.38 atmosphere 1010.0 30 < th dose independent rect. 2 1
99 93.38 radiation 1.0 30 < th dose independent rect. 2 1
104 93.38 precipitation 0.1 30 < th dose independent rect. 2 1
105 93.38 temperature 10.0 30 > th dose independent rect. 3 23
106 93.38 humidity 50.0 30 > th dose dependent rect. 2 1
109 93.38 radiation 1.0 30 < th dose dependent rect. 2 1
114 93.38 precipitation 0.1 30 < th dose dependent rect. 2 1
122 93.54 atmosphere 1015.0 30 < th dose dependent rect. 2 1
123 93.63 temperature 30.0 30 < th dose dependent rect. 2 1
124 93.67 wind 1.0 30 > th dose independent rect. 2 1
141 93.97 precipitation 0.1 30 < th dose independent rect. 3 23
142 93.97 precipitation 0.1 30 < th dose dependent rect. 3 23
183 94.99 wind 9.0 30 < th dose independent rect. 3 23
188 95.76 humidity 50.0 30 > th dose independent rect. 3 23
223 97.32 humidity 80.0 10 < th dose independent rect. 5 3
234 97.45 humidity 80.0 10 < th dose independent rect. 23 9
243 97.62 radiation 10.0 30 > th dose independent rect. 7 1
250 97.77 humidity 90.0 90 < th dose independent rect. 2 1
251 97.77 humidity 90.0 90 < th dose independent rect. 1 7
315 98.70 temperature 30.0 30 < th dose independent rect. 3 23
317 98.78 humidity 90.0 90 < th dose independent rect. 1 5
328 99.01 radiation 10.0 10 > th dose independent rect. 16 16
338 99.11 radiation 10.0 30 < th dose dependent rect. 3 23
345 99.21 wind 9.0 30 < th dose dependent rect. 3 23
370 99.51 humidity 80.0 14400 < th dose dependent rect. 1 8
382 99.66 wind 5.0 14400 < th dose dependent rect. 11 1
385 99.68 atmosphere 1005.0 30 > th dose independent rect. 2 6
395 99.78 atmosphere 1015.0 30 < th dose independent rect. 3 23
414 99.92 wind 3.0 14400 > th dose independent rect. 10 2
418 99.93 wind 3.0 30 < th dose dependent rect. 2 6
432 100.05 wind 1.0 14400 > th dose dependent rect. 11 1
435 100.06 atmosphere 995.0 720 > th dose independent rect. 7 8
446 100.17 wind 3.0 14400 < th dose independent rect. 10 2
452 100.20 wind 1.0 10 < th dose independent rect. 12 15
457 100.21 radiation 10.0 30 < th dose independent rect. 3 23
461 100.23 humidity 80.0 720 > th dose dependent rect. 3 1
469 100.28 humidity 90.0 90 < th dose dependent rect. 2 5
473 100.31 wind 9.0 720 < th dose independent rect. 19 8
479 100.33 atmosphere 995.0 720 > th dose independent rect. 23 16
496 100.43 temperature 25.0 1440 < th dose independent rect. 1 1
497 100.43 wind 1.0 10 < th dose independent rect. 17 10
500 100.44 wind 1.0 10 < th dose independent rect. 21 6
512 100.49 precipitation 0.1 720 < th dose independent rect. 19 8
515 100.49 precipitation 0.1 720 < th dose dependent rect. 19 8
517 100.50 wind 9.0 720 < th dose independent rect. 15 16
518 100.50 precipitation 0.1 720 < th dose independent rect. 15 16
521 100.50 precipitation 0.1 720 < th dose dependent rect. 15 16
523 100.51 temperature 10.0 720 > th dose independent rect. 7 8
524 100.51 atmosphere 1015.0 720 < th dose independent rect. 7 8
525 100.51 temperature 10.0 720 > th dose independent rect. 15 16
528 100.51 humidity 70.0 4320 > th dose dependent rect. 3 6
557 100.64 atmosphere 1000.0 30 > th dose independent rect. 8 18
562 100.66 wind 5.0 30 < th dose independent rect. 2 6
565 100.67 temperature 10.0 720 > th dose independent rect. 19 8
566 100.67 temperature 30.0 720 < th dose independent rect. 19 8
567 100.67 humidity 50.0 720 > th dose independent rect. 19 8
568 100.67 atmosphere 995.0 720 > th dose independent rect. 19 8
569 100.67 radiation 1.0 720 < th dose independent rect. 19 8
574 100.67 temperature 10.0 720 > th dose independent rect. 3 16
575 100.67 radiation 1.0 720 < th dose dependent rect. 19 8
595 100.74 temperature 25.0 30 > th dose independent rect. 7 1
611 100.75 atmosphere 1000.0 30 > th dose independent rect. 16 10
612 100.75 wind 1.0 10 < th dose independent rect. 8 19
620 100.77 precipitation 0.1 720 < th dose independent rect. 15 8
623 100.77 precipitation 0.1 720 < th dose dependent rect. 15 8
634 100.80 temperature 10.0 30 > th dose dependent rect. 3 23
644 100.84 wind 1.0 10 > th dose independent rect. 8 23
645 100.84 wind 3.0 30 < th dose dependent rect. 2 11
650 100.86 humidity 90.0 4320 < th dose independent rect. 4 4
661 100.88 radiation 40.0 10 < th dose independent rect. 3 23
675 100.91 temperature 10.0 30 > th dose dependent rect. 2 6
676 100.92 wind 7.0 14400 < th dose independent rect. 9 1
679 100.92 wind 1.0 14400 < th dose dependent rect. 2 1
696 100.96 humidity 90.0 10 < th dose dependent rect. 7 1
731 101.02 precipitation 0.1 720 < th dose independent rect. 7 8
733 101.02 precipitation 0.1 720 < th dose dependent rect. 7 8
734 101.02 radiation 20.0 10 < th dose dependent rect. 16 10
736 101.03 humidity 70.0 14400 < th dose independent rect. 8 2
737 101.03 temperature 10.0 720 > th dose independent rect. 15 8
738 101.03 temperature 10.0 720 > th dose independent rect. 23 16
742 101.04 humidity 70.0 14400 > th dose independent rect. 8 1
743 101.04 wind 9.0 4320 < th dose independent rect. 3 6
745 101.05 humidity 90.0 720 > th dose independent rect. 3 1
746 101.05 humidity 70.0 14400 < th dose independent rect. 6 4
772 101.07 humidity 70.0 14400 > th dose independent rect. 4 6
798 101.08 wind 3.0 14400 > th dose dependent rect. 9 6
848 101.13 atmosphere 1010.0 30 < th dose independent rect. 2 6
849 101.13 humidity 50.0 30 > th dose independent rect. 8 18
853 101.14 radiation 10.0 30 < th dose independent rect. 16 10
901 101.19 radiation 40.0 720 < th dose independent rect. 15 16
902 101.19 temperature 15.0 30 > th dose independent rect. 8 18
907 101.20 temperature 10.0 1440 > th dose independent rect. 3 6
910 101.20 humidity 50.0 1440 > th dose independent rect. 3 6
912 101.20 atmosphere 995.0 1440 > th dose independent rect. 3 6
913 101.20 atmosphere 1015.0 720 < th dose independent rect. 3 16
914 101.20 temperature 10.0 1440 > th dose independent rect. 9 18
923 101.21 humidity 50.0 10 > th dose independent rect. 2 14
926 101.21 wind 7.0 14400 < th dose dependent rect. 9 6
928 101.22 precipitation 0.1 30 < th dose independent rect. 2 6
929 101.22 precipitation 0.1 30 < th dose dependent rect. 2 6
933 101.23 wind 5.0 14400 < th dose independent rect. 9 6
954 101.25 temperature 10.0 720 > th dose independent rect. 3 8
955 101.25 atmosphere 995.0 720 > th dose independent rect. 3 8
956 101.25 temperature 10.0 720 > th dose independent rect. 11 16
957 101.25 humidity 70.0 4320 > th dose dependent sin 5 NA
971 101.27 temperature 10.0 30 > th dose independent rect. 2 6
973 101.27 temperature 30.0 30 < th dose independent rect. 2 6
974 101.27 humidity 50.0 30 > th dose independent rect. 2 6
976 101.27 humidity 90.0 4320 > th dose independent rect. 3 6
977 101.27 atmosphere 995.0 30 > th dose independent rect. 2 6
984 101.27 humidity 50.0 30 > th dose dependent rect. 3 23
988 101.28 temperature 10.0 1440 > th dose independent rect. 17 10
991 101.28 humidity 50.0 30 > th dose independent rect. 16 10
992 101.28 radiation 30.0 1440 < th dose independent rect. 17 10
998 101.28 temperature 10.0 1440 > th dose independent rect. 3 14