Os04g0520700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF584 family protein.
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Os04g0520700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF584 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.35 | 0.608 | 11.8 | -2.22 | 1.81 | 0.734 | 0.577 | 6.98 | 0.529 | 2.77 | 1.171 | 8694 | -- | -- |
| 185.82 | 0.635 | 11.6 | -1.06 | 1.68 | 0.812 | 0.762 | -- | 0.909 | 2.73 | 17.96 | 19083 | -- | -- |
| 163.23 | 0.595 | 11.8 | -2.22 | 1.81 | 0.763 | -- | 7.2 | 0.551 | 2.78 | 1.39 | 7373 | -- | -- |
| 182.19 | 0.629 | 11.6 | -0.973 | 1.82 | 0.891 | -- | -- | 1.04 | 2.61 | 32.13 | 20978 | -- | -- |
| 289.19 | 0.796 | 11.6 | -0.781 | -- | 0.977 | -- | 0.436 | 0.797 | -- | 1.39 | 7373 | -- | -- |
| 210.59 | 0.68 | 11.7 | -0.842 | 1.79 | -- | 0.76 | -- | 0.728 | 2.71 | -- | -- | -- | -- |
| 212.6 | 0.683 | 11.7 | -0.861 | 1.79 | -- | -- | -- | 0.723 | 2.73 | -- | -- | -- | -- |
| 206.15 | 0.669 | 11.6 | -0.607 | -- | 1.74 | -- | -- | 0.914 | -- | 13.55 | 243 | -- | -- |
| 204.29 | 0.666 | 11.6 | -- | 1.76 | 0.902 | -- | -- | 1.14 | 2.67 | 30 | 20951 | -- | -- |
| 398.68 | 0.933 | 11.7 | -0.784 | -- | -- | -- | -- | 0.769 | -- | -- | -- | -- | -- |
| 232.12 | 0.713 | 11.6 | -- | 1.77 | -- | -- | -- | 0.819 | 2.73 | -- | -- | -- | -- |
| 215.76 | 0.684 | 11.6 | -- | -- | 1.75 | -- | -- | 0.981 | -- | 13.56 | 238 | -- | -- |
| 414.91 | 0.951 | 11.6 | -- | -- | -- | -- | -- | 0.856 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.04 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 2 | 147.10 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 5 | 147.61 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 8 | 148.20 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 14 | 148.92 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 15 | 149.01 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 16 | 149.01 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 17 | 149.08 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 3 |
| 26 | 149.42 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 28 | 149.53 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 39 | 149.87 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 61 | 150.80 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 65 | 150.85 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 13 |
| 74 | 150.90 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 96 | 151.13 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 97 | 151.14 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 106 | 151.26 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 177 | 151.89 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 6 |
| 182 | 151.93 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 189 | 151.98 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 190 | 151.98 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 201 | 152.02 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 203 | 152.04 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 231 | 152.18 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 251 | 152.29 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 254 | 152.30 | humidity | 80.0 | 14400 | > th | dose independent | sin | 20 | NA |
| 255 | 152.30 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 339 | 152.64 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 6 | 9 |
| 372 | 152.77 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 6 | 5 |
| 391 | 152.83 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 512 | 153.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 514 | 153.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 575 | 153.49 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 13 |
| 621 | 153.63 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 1 | NA |
| 740 | 153.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 955 | 154.36 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 12 | 9 |