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Os04g0514800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Dual specificity kinase 1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.79 (0.0302) R2 : 0.511
β1 : -2.37 (0.112) R2dD : 0.524 R2D : 0.353
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.26 (0.154) R2dE : 0.0807 R2E : -0.0512
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.592 (0.0667) R2dN8 : 0.124 R2N8 : -0.0323
σ : 0.558
deviance : 143.74
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 1.499
memory length : 1487
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
133.15 0.542 7.78 -2.31 0.41 1.34 0.683 0.82 -0.583 5.84 1.348 1492 -- --
133.16 0.537 7.79 -2.39 0.471 1.29 0.541 -- -0.585 5.26 1.491 1532 -- --
134.05 0.539 7.78 -2.3 0.439 1.34 -- 0.736 -0.573 5.58 1.36 1511 -- --
134.13 0.539 7.79 -2.38 0.487 1.36 -- -- -0.588 4.83 1.45 1541 -- --
143.1 0.557 7.77 -2.28 -- 1.31 -- 0.817 -0.558 -- 1.36 1479 -- --
153.08 0.58 7.75 -2.21 0.46 -- 0.55 -- -0.446 7.25 -- -- -- --
153.85 0.581 7.75 -2.19 0.46 -- -- -- -0.446 7.47 -- -- -- --
143.74 0.558 7.79 -2.37 -- 1.26 -- -- -0.592 -- 1.499 1487 -- --
253.17 0.741 7.73 -- 0.289 1.32 -- -- -0.452 4.85 7.75 2957 -- --
165.14 0.6 7.76 -2.19 -- -- -- -- -0.439 -- -- -- -- --
280.54 0.784 7.7 -- 0.442 -- -- -- -0.202 7.8 -- -- -- --
254.97 0.744 7.73 -- -- 1.32 -- -- -0.455 -- 8.48 7278 -- --
291.12 0.796 7.71 -- -- -- -- -- -0.197 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 129.66 radiation 20 14400 > th dose dependent rect. 16 15
2 130.06 radiation 20 14400 > th dose dependent rect. 16 2
16 130.22 humidity 80 720 < th dose dependent rect. 18 14
17 130.31 humidity 80 720 < th dose dependent rect. 18 6
19 130.47 humidity 70 14400 > th dose independent rect. 19 1
21 130.51 humidity 70 14400 > th dose independent rect. 19 12
23 130.72 humidity 70 14400 > th dose independent rect. 19 9
26 130.74 humidity 80 1440 < th dose dependent rect. 16 16
28 130.76 humidity 70 14400 > th dose independent rect. 19 4
44 131.14 radiation 40 1440 > th dose independent rect. 14 1
47 131.19 radiation 10 1440 > th dose independent rect. 15 15
49 131.20 radiation 40 1440 > th dose independent rect. 14 19
50 131.23 radiation 10 1440 > th dose independent rect. 15 3
64 131.27 humidity 70 14400 < th dose independent rect. 18 13
65 131.28 radiation 40 14400 > th dose dependent rect. 14 19
85 131.40 humidity 70 14400 < th dose independent rect. 18 4
94 131.41 radiation 40 1440 < th dose independent rect. 14 1
97 131.47 humidity 80 720 < th dose independent rect. 19 3
102 131.54 radiation 30 14400 < th dose independent rect. 15 17
109 131.63 radiation 40 1440 > th dose dependent rect. 14 19
110 131.65 radiation 30 14400 < th dose independent rect. 15 3
111 131.65 radiation 30 14400 < th dose independent rect. 15 5
114 131.65 radiation 30 14400 < th dose independent rect. 15 12
124 131.67 radiation 40 1440 < th dose independent rect. 14 19
125 131.68 radiation 40 1440 < th dose independent rect. 14 14
128 131.71 radiation 40 1440 < th dose independent rect. 14 3
131 131.72 radiation 40 1440 < th dose independent rect. 14 7
132 131.72 temperature 30 720 > th dose dependent rect. 18 1
155 131.81 radiation 40 1440 < th dose independent rect. 14 17
182 131.90 humidity 80 1440 < th dose dependent sin 13 NA
186 131.95 humidity 70 720 > th dose independent rect. 18 9
187 131.97 humidity 70 1440 < th dose independent rect. 15 5
200 131.99 humidity 70 1440 > th dose independent rect. 15 13
206 132.01 humidity 70 1440 > th dose independent rect. 15 6
210 132.02 humidity 70 1440 > th dose independent rect. 15 10
212 132.02 radiation 40 1440 > th dose dependent rect. 14 1
260 132.16 humidity 70 1440 > th dose independent sin 13 NA
264 132.22 radiation 40 4320 > th dose dependent rect. 13 21
319 132.44 radiation 10 1440 < th dose dependent rect. 18 10
325 132.48 humidity 70 1440 < th dose independent sin 14 NA
364 132.66 radiation 40 14400 < th dose independent rect. 8 1
365 132.67 temperature 30 720 < th dose independent rect. 17 2
388 132.81 temperature 30 720 < th dose independent rect. 17 10
390 132.81 wind 5 43200 < th dose dependent rect. 3 2
418 132.87 temperature 25 14400 > th dose dependent rect. 23 1
433 132.91 temperature 30 14400 > th dose dependent rect. 16 2
435 132.92 humidity 70 1440 > th dose independent rect. 18 3
438 132.92 wind 1 43200 > th dose dependent rect. 3 1
439 132.92 radiation 10 1440 < th dose dependent rect. 18 3
446 132.94 humidity 70 1440 > th dose independent rect. 18 7
449 132.94 radiation 40 14400 > th dose dependent rect. 8 1
457 132.99 radiation 10 1440 > th dose independent sin 13 NA
508 133.06 radiation 1 1440 > th dose dependent rect. 18 12
532 133.09 radiation 30 14400 < th dose independent sin 12 NA
556 133.18 radiation 40 14400 > th dose dependent sin 12 NA
567 133.22 temperature 30 14400 > th dose independent rect. 17 1
621 133.30 temperature 30 14400 < th dose independent rect. 17 1
633 133.33 temperature 30 14400 < th dose independent rect. 17 11
652 133.34 temperature 30 14400 < th dose independent rect. 17 14
654 133.35 temperature 30 14400 < th dose independent rect. 17 4
660 133.36 temperature 30 14400 < th dose independent rect. 17 8
687 133.41 radiation 40 1440 < th dose dependent rect. 16 14
691 133.43 radiation 40 14400 > th dose independent rect. 15 18
694 133.45 wind 5 43200 < th dose independent rect. 3 11
699 133.46 humidity 90 43200 > th dose dependent rect. 9 1
700 133.47 wind 1 90 < th dose independent rect. 4 1
705 133.48 wind 5 43200 > th dose independent rect. 11 1
725 133.50 wind 5 43200 < th dose independent rect. 24 14
736 133.52 wind 3 43200 > th dose independent rect. 3 1
750 133.53 radiation 40 1440 < th dose dependent rect. 16 12
751 133.54 wind 5 43200 > th dose independent rect. 10 3
758 133.56 wind 5 43200 > th dose independent rect. 3 11
759 133.56 wind 1 90 < th dose dependent rect. 4 1
780 133.61 wind 5 43200 > th dose independent rect. 24 14
782 133.61 temperature 30 14400 > th dose dependent sin 13 NA
805 133.66 wind 3 43200 < th dose independent rect. 3 1
806 133.66 wind 5 43200 < th dose independent rect. 10 2
828 133.68 radiation 1 1440 > th dose dependent rect. 16 2
829 133.68 radiation 40 1440 < th dose dependent rect. 16 5
853 133.71 radiation 40 14400 > th dose independent rect. 8 1
870 133.71 radiation 40 1440 < th dose dependent rect. 16 2