Os04g0512100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os04g0512100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.23 | 0.473 | 2.75 | -0.0502 | 0.0698 | -2.1 | -0.39 | 9.44 | 0.106 | 15.1 | 0.09489 | 259 | -- | -- |
| 104.33 | 0.479 | 2.78 | -0.0875 | 0.0625 | -0.136 | -0.454 | -- | 0.113 | 15.3 | 0.09489 | 259 | -- | -- |
| 101.72 | 0.47 | 2.75 | -0.0583 | 0.0726 | -2.11 | -- | 9.53 | 0.103 | 16.1 | 0.1201 | 259 | -- | -- |
| 103.82 | 0.475 | 2.79 | -0.159 | 0.0717 | 0.568 | -- | -- | 0.115 | 15.9 | 0.4995 | 259 | -- | -- |
| 102 | 0.47 | 2.75 | -0.0622 | -- | -2.09 | -- | 9.47 | 0.102 | -- | 0.1323 | 259 | -- | -- |
| 104.36 | 0.479 | 2.78 | -0.09 | 0.0648 | -- | -0.449 | -- | 0.113 | 15.4 | -- | -- | -- | -- |
| 104.85 | 0.48 | 2.79 | -0.0984 | 0.0837 | -- | -- | -- | 0.111 | 17.8 | -- | -- | -- | -- |
| 104.05 | 0.475 | 2.79 | -0.14 | -- | 0.626 | -- | -- | 0.116 | -- | 0.4998 | 259 | -- | -- |
| 104.25 | 0.476 | 2.78 | -- | 0.0692 | 0.534 | -- | -- | 0.131 | 16.4 | 0.4622 | 259 | -- | -- |
| 105.21 | 0.479 | 2.79 | -0.101 | -- | -- | -- | -- | 0.109 | -- | -- | -- | -- | -- |
| 105.11 | 0.48 | 2.78 | -- | 0.0852 | -- | -- | -- | 0.122 | 17.7 | -- | -- | -- | -- |
| 104.55 | 0.476 | 2.78 | -- | -- | 0.552 | -- | -- | 0.131 | -- | 0.4382 | 259 | -- | -- |
| 105.48 | 0.479 | 2.78 | -- | -- | -- | -- | -- | 0.12 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.49 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 4 |
| 9 | 88.49 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 4 |
| 17 | 88.50 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 23 | 1 |
| 19 | 88.50 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 2 |
| 24 | 88.50 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 23 | 1 |
| 26 | 88.50 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 41 | 88.61 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 22 | 1 |
| 42 | 88.61 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 86 | 90.82 | wind | 5.0 | 10 | > th | dose independent | rect. | 22 | 8 |
| 99 | 91.36 | wind | 3.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 155 | 93.13 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 183 | 93.44 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 189 | 93.67 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 208 | 94.22 | wind | 9.0 | 90 | > th | dose dependent | rect. | 21 | 13 |
| 463 | 97.47 | wind | 5.0 | 10 | < th | dose independent | sin | 9 | NA |
| 501 | 97.77 | wind | 5.0 | 10 | > th | dose independent | sin | 9 | NA |
| 509 | 97.90 | wind | 1.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 510 | 97.90 | wind | 1.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 538 | 98.15 | precipitation | 0.1 | 270 | > th | dose independent | sin | 15 | NA |
| 539 | 98.15 | precipitation | 0.1 | 270 | < th | dose independent | sin | 15 | NA |
| 540 | 98.15 | temperature | 25.0 | 90 | > th | dose independent | rect. | 9 | 1 |
| 542 | 98.15 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 15 | NA |
| 575 | 98.46 | wind | 5.0 | 10 | > th | dose dependent | sin | 10 | NA |
| 651 | 98.93 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 10 | 14 |
| 652 | 98.93 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 692 | 99.06 | humidity | 80.0 | 90 | < th | dose independent | rect. | 11 | 10 |
| 699 | 99.08 | humidity | 80.0 | 90 | < th | dose independent | rect. | 11 | 12 |
| 711 | 99.16 | wind | 9.0 | 1440 | < th | dose independent | rect. | 1 | 9 |
| 717 | 99.17 | humidity | 80.0 | 90 | > th | dose independent | rect. | 8 | 15 |
| 728 | 99.19 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 14 | NA |
| 754 | 99.25 | wind | 7.0 | 270 | > th | dose dependent | rect. | 20 | 2 |
| 756 | 99.26 | radiation | 10.0 | 30 | > th | dose independent | rect. | 9 | 2 |
| 773 | 99.28 | humidity | 80.0 | 30 | < th | dose independent | rect. | 11 | 22 |
| 797 | 99.38 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 14 |
| 821 | 99.46 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 846 | 99.48 | humidity | 80.0 | 90 | > th | dose independent | rect. | 12 | 11 |
| 850 | 99.49 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 9 | 2 |