Os04g0511400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sugar transporter family protein.
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Os04g0511400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sugar transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 225.95 | 0.706 | 5.18 | -3.64 | 1.11 | 1.73 | -1.59 | -7.3 | -0.752 | 21 | 26.5 | 1151 | -- | -- |
| 249.14 | 0.735 | 5.04 | -2.23 | 0.983 | 1.32 | -1.89 | -- | -0.556 | 21.4 | 25.2 | 2151 | -- | -- |
| 234.39 | 0.713 | 5.19 | -3.62 | 1.08 | 1.76 | -- | -7.37 | -0.819 | 20.9 | 25.94 | 1120 | -- | -- |
| 252.5 | 0.74 | 5.05 | -2.03 | 1.24 | 0.887 | -- | -- | -0.723 | 21.2 | 24.6 | 9079 | -- | -- |
| 271.85 | 0.768 | 5.17 | -3.58 | -- | 2.34 | -- | -7.52 | -0.985 | -- | 24.23 | 830 | -- | -- |
| 270.6 | 0.771 | 4.98 | -1.76 | 1.29 | -- | -1.67 | -- | -0.397 | 21.4 | -- | -- | -- | -- |
| 280.73 | 0.785 | 4.98 | -1.7 | 1.29 | -- | -- | -- | -0.395 | 21.4 | -- | -- | -- | -- |
| 294.75 | 0.8 | 4.98 | -2.1 | -- | 1.71 | -- | -- | -0.56 | -- | 24.6 | 820 | -- | -- |
| 325.43 | 0.84 | 4.88 | -- | 1.32 | -0.846 | -- | -- | 0.113 | 21.4 | 21.06 | 46888 | -- | -- |
| 378.8 | 0.909 | 4.95 | -1.7 | -- | -- | -- | -- | -0.4 | -- | -- | -- | -- | -- |
| 357.23 | 0.884 | 4.94 | -- | 1.29 | -- | -- | -- | -0.206 | 21.3 | -- | -- | -- | -- |
| 376.8 | 0.904 | 4.94 | -- | -- | -1.19 | -- | -- | -0.323 | -- | 35.39 | 47377 | -- | -- |
| 454.71 | 0.995 | 4.9 | -- | -- | -- | -- | -- | -0.212 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 211.60 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 2 | 212.00 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 3 | 213.17 | humidity | 90 | 43200 | < th | dose independent | rect. | 13 | 16 |
| 15 | 213.85 | humidity | 80 | 43200 | > th | dose dependent | sin | 16 | NA |
| 18 | 213.99 | humidity | 80 | 43200 | > th | dose dependent | rect. | 11 | 16 |
| 20 | 214.06 | humidity | 90 | 43200 | < th | dose independent | sin | 14 | NA |
| 22 | 214.23 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 18 |
| 48 | 214.89 | humidity | 80 | 43200 | > th | dose dependent | rect. | 16 | 9 |
| 57 | 215.19 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 78 | 215.48 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 16 |
| 80 | 215.54 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 15 |
| 95 | 215.82 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 100 | 215.96 | humidity | 80 | 43200 | > th | dose dependent | no | NA | NA |
| 110 | 216.02 | humidity | 80 | 43200 | > th | dose dependent | rect. | 16 | 23 |
| 127 | 216.15 | humidity | 80 | 43200 | > th | dose dependent | rect. | 23 | 23 |
| 145 | 216.34 | humidity | 90 | 43200 | > th | dose independent | sin | 14 | NA |
| 152 | 216.43 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 10 |
| 183 | 216.78 | humidity | 80 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 200 | 217.03 | humidity | 80 | 43200 | > th | dose independent | rect. | 4 | 13 |
| 202 | 217.05 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 219 | 217.25 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 227 | 217.31 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 335 | 218.57 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 341 | 218.63 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 369 | 218.88 | humidity | 80 | 43200 | > th | dose independent | sin | 1 | NA |
| 387 | 219.06 | wind | 3 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 401 | 219.28 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 440 | 219.64 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 458 | 219.74 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 471 | 219.84 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 619 | 220.89 | humidity | 80 | 43200 | > th | dose dependent | sin | 5 | NA |
| 646 | 221.03 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 663 | 221.15 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 679 | 221.21 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 708 | 221.38 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 739 | 221.56 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 4 |
| 741 | 221.57 | humidity | 90 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 770 | 221.75 | wind | 7 | 43200 | < th | dose independent | rect. | 1 | 17 |
| 775 | 221.77 | humidity | 80 | 43200 | < th | dose independent | sin | 1 | NA |
| 784 | 221.80 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 6 |
| 787 | 221.82 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 809 | 221.92 | humidity | 90 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 814 | 221.95 | wind | 7 | 43200 | > th | dose independent | rect. | 1 | 17 |
| 837 | 222.07 | humidity | 90 | 43200 | < th | dose independent | no | NA | NA |
| 897 | 222.38 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 925 | 222.53 | wind | 7 | 43200 | < th | dose independent | sin | 23 | NA |
| 962 | 222.71 | wind | 9 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 976 | 222.78 | wind | 7 | 43200 | > th | dose independent | sin | 23 | NA |