Os04g0510000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0510000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.86 | 0.269 | 3.28 | 0.233 | 0.183 | 0.289 | -0.0896 | 1.25 | -0.079 | 7.54 | 91.01 | 5903 | -- | -- |
| 34.96 | 0.275 | 3.26 | 0.168 | 0.223 | 0.35 | -0.0958 | -- | -0.101 | 7.24 | 91.01 | 4788 | -- | -- |
| 32.88 | 0.267 | 3.28 | 0.232 | 0.182 | 0.288 | -- | 1.26 | -0.0787 | 7.65 | 91 | 5913 | -- | -- |
| 34.93 | 0.275 | 3.27 | 0.138 | 0.194 | 0.353 | -- | -- | -0.109 | 7.22 | 91.85 | 4565 | -- | -- |
| 34.64 | 0.274 | 3.28 | 0.234 | -- | 0.291 | -- | 1.25 | -0.0739 | -- | 91 | 5849 | -- | -- |
| 36.47 | 0.283 | 3.26 | 0.127 | 0.18 | -- | -0.107 | -- | -0.0394 | 7.47 | -- | -- | -- | -- |
| 36.5 | 0.283 | 3.26 | 0.124 | 0.18 | -- | -- | -- | -0.039 | 7.62 | -- | -- | -- | -- |
| 36.76 | 0.282 | 3.28 | 0.177 | -- | 0.332 | -- | -- | -0.104 | -- | 92 | 7136 | -- | -- |
| 35.41 | 0.277 | 3.28 | -- | 0.189 | 0.343 | -- | -- | -0.112 | 7.26 | 88 | 4461 | -- | -- |
| 38.24 | 0.289 | 3.26 | 0.127 | -- | -- | -- | -- | -0.0363 | -- | -- | -- | -- | -- |
| 36.9 | 0.284 | 3.26 | -- | 0.181 | -- | -- | -- | -0.0529 | 7.57 | -- | -- | -- | -- |
| 37.14 | 0.284 | 3.28 | -- | -- | 0.343 | -- | -- | -0.108 | -- | 87.79 | 4327 | -- | -- |
| 38.66 | 0.29 | 3.27 | -- | -- | -- | -- | -- | -0.0504 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.03 | humidity | 80 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 4 | 32.18 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 3 | 23 |
| 6 | 32.20 | humidity | 80 | 14400 | < th | dose dependent | rect. | 21 | 13 |
| 17 | 32.40 | humidity | 70 | 14400 | > th | dose independent | rect. | 20 | 14 |
| 18 | 32.41 | humidity | 70 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 29 | 32.42 | humidity | 70 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 32 | 32.46 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 33 | 32.47 | humidity | 70 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 49 | 32.63 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 73 | 32.86 | wind | 3 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 78 | 32.89 | humidity | 70 | 4320 | > th | dose independent | rect. | 8 | 7 |
| 80 | 32.89 | humidity | 80 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 81 | 32.90 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 84 | 32.90 | humidity | 70 | 4320 | > th | dose dependent | rect. | 4 | 7 |
| 126 | 32.96 | humidity | 50 | 4320 | > th | dose dependent | rect. | 23 | 16 |
| 152 | 32.99 | humidity | 70 | 4320 | > th | dose independent | sin | 3 | NA |
| 157 | 32.99 | humidity | 50 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 194 | 33.01 | humidity | 70 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 213 | 33.01 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 245 | 33.03 | wind | 3 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 262 | 33.03 | humidity | 50 | 4320 | > th | dose dependent | sin | 4 | NA |
| 264 | 33.03 | humidity | 80 | 14400 | < th | dose dependent | sin | 8 | NA |
| 271 | 33.03 | humidity | 90 | 4320 | < th | dose dependent | rect. | 23 | 17 |
| 305 | 33.05 | humidity | 90 | 4320 | < th | dose dependent | rect. | 3 | 12 |
| 314 | 33.06 | humidity | 50 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 343 | 33.08 | humidity | 70 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 390 | 33.09 | humidity | 90 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 434 | 33.11 | humidity | 70 | 4320 | < th | dose independent | sin | 2 | NA |
| 458 | 33.12 | humidity | 90 | 4320 | < th | dose dependent | sin | 4 | NA |
| 463 | 33.12 | humidity | 90 | 4320 | < th | dose dependent | rect. | 10 | 5 |
| 685 | 33.20 | humidity | 70 | 4320 | > th | dose independent | rect. | 16 | 23 |
| 742 | 33.22 | humidity | 70 | 4320 | > th | dose independent | no | NA | NA |
| 800 | 33.23 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 840 | 33.23 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 23 |
| 859 | 33.24 | humidity | 70 | 4320 | > th | dose independent | rect. | 13 | 23 |
| 965 | 33.28 | humidity | 80 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 988 | 33.29 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 1000 | 33.30 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 3 |