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Os04g0509600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Ammonium transporter Amt1;2 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.8 (0.028) R2 : 0.915
β1 : 2.63 (0.103) R2dD : 0.128 R2D : 0.0863
β2 : 2.13 (0.105) R2dC : 0.162 R2C : 0.492
β3 : -3.83 (0.135) R2dE : 0.32 R2E : 0.61
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.553 (0.0601) R2dN8 : 0.021 R2N8 : -0.00574
σ : 0.523
deviance : 126.23
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C
peak time of C : 5
E
wheather : temperature
threshold : 16.74
memory length : 257
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 12.7
open length of G : 6.32

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
121.98 0.519 14.8 2.83 2.05 -4.05 -0.134 2.47 0.609 4.95 17.65 273 12.4 6.6
124.54 0.52 14.8 2.71 2.1 -3.92 -0.762 -- 0.572 4.86 17.05 260 12.7 6.43
121.93 0.514 14.8 2.84 2.06 -4.05 -- 2.64 0.61 4.96 17.68 272 12.5 6.57
126.23 0.523 14.8 2.63 2.13 -3.83 -- -- 0.553 5 16.74 257 12.7 6.32
191.94 0.645 14.8 3.16 -- -5.29 -- 2.64 1.06 -- 14.3 303 11.6 7.25
324.92 0.845 14.8 2.29 4.37 -- 0.222 -- 0.353 5.57 -- -- -- --
325.04 0.844 14.8 2.29 4.37 -- -- -- 0.352 5.56 -- -- -- --
144.8 0.56 14.8 2.84 -- -5.44 -- -- 0.607 -- 11.04 349 10.6 8.41
303.41 0.811 14.9 -- 2.26 -3.52 -- -- 0.261 4.86 14.13 247 12.9 6.15
1318.53 1.7 14.8 2.43 -- -- -- -- 0.458 -- -- -- -- --
463.36 1.01 14.8 -- 4.41 -- -- -- 0.0972 5.54 -- -- -- --
339.94 0.859 14.8 -- -- -5.23 -- -- 0.344 -- 4.339 391 10.2 8.2
1474.74 1.79 14.9 -- -- -- -- -- 0.188 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 126.97 temperature 15.0 270 > th dose dependent rect. 12 7
7 132.00 temperature 25.0 270 > th dose independent rect. 13 6
23 141.90 temperature 20.0 270 > th dose dependent rect. 14 3
35 146.79 temperature 25.0 270 > th dose independent rect. 14 3
41 148.14 temperature 10.0 270 > th dose dependent rect. 13 17
45 148.93 temperature 25.0 10 > th dose independent rect. 14 6
48 149.54 temperature 15.0 10 > th dose dependent rect. 14 6
53 150.42 radiation 1.0 270 > th dose independent rect. 13 16
54 150.57 radiation 1.0 270 > th dose independent rect. 13 6
72 151.56 radiation 1.0 270 < th dose independent sin 16 NA
75 152.65 radiation 1.0 270 > th dose independent sin 16 NA
78 152.76 radiation 10.0 270 < th dose dependent sin 15 NA
162 162.06 humidity 90.0 270 < th dose independent rect. 13 5
179 163.55 radiation 1.0 270 > th dose dependent rect. 14 17
184 164.03 humidity 90.0 270 < th dose independent rect. 12 7
198 164.26 radiation 10.0 270 > th dose independent rect. 14 3
224 165.15 radiation 1.0 270 > th dose dependent rect. 14 4
262 166.54 radiation 1.0 270 > th dose dependent sin 14 NA
303 170.09 radiation 1.0 270 < th dose independent rect. 14 11
351 171.52 humidity 90.0 270 < th dose independent rect. 14 3
357 171.72 wind 3.0 270 > th dose independent rect. 13 5
374 172.33 radiation 1.0 270 < th dose independent rect. 10 15
378 172.38 radiation 10.0 270 < th dose dependent rect. 15 10
475 176.53 radiation 1.0 270 < th dose dependent rect. 9 16
562 179.85 temperature 15.0 270 > th dose dependent sin 19 NA
571 180.16 precipitation 0.1 270 < th dose independent rect. 13 5
572 180.16 precipitation 0.1 270 < th dose dependent rect. 13 5
578 180.34 atmosphere 995.0 270 > th dose independent rect. 17 21
609 180.88 wind 1.0 270 > th dose dependent rect. 14 3
651 181.84 humidity 90.0 10 < th dose independent rect. 14 6
662 182.18 humidity 90.0 270 < th dose dependent rect. 13 5
664 182.27 temperature 30.0 270 < th dose dependent rect. 9 14
681 182.65 temperature 30.0 270 < th dose independent rect. 17 8
683 182.69 wind 9.0 270 < th dose independent rect. 13 5
695 183.10 precipitation 0.1 270 < th dose independent rect. 12 7
697 183.10 precipitation 0.1 270 < th dose dependent rect. 12 7
713 183.42 humidity 90.0 270 < th dose dependent rect. 14 3
729 183.56 temperature 30.0 270 < th dose independent rect. 8 16
732 183.64 precipitation 0.1 270 < th dose independent rect. 14 3
733 183.64 precipitation 0.1 270 < th dose dependent rect. 14 3
763 184.45 wind 9.0 270 < th dose independent rect. 14 3
765 184.46 temperature 10.0 270 > th dose independent rect. 13 5
767 184.46 atmosphere 1010.0 270 < th dose independent rect. 13 5
769 184.46 temperature 10.0 270 > th dose independent rect. 18 19
822 185.69 temperature 10.0 270 > th dose independent rect. 14 3
824 185.69 atmosphere 1010.0 270 < th dose independent rect. 14 3
826 185.69 temperature 10.0 270 > th dose independent rect. 17 21
832 185.84 wind 9.0 270 < th dose independent rect. 18 19
834 185.86 wind 9.0 270 < th dose independent rect. 12 7
900 187.07 atmosphere 1010.0 270 < th dose independent rect. 12 7
905 187.11 temperature 30.0 270 < th dose dependent sin 19 NA
921 187.54 humidity 70.0 270 > th dose independent rect. 17 8
928 187.67 temperature 10.0 270 > th dose independent rect. 12 7
931 187.67 temperature 10.0 270 > th dose independent rect. 19 17
932 187.67 atmosphere 995.0 270 > th dose independent rect. 19 17
994 188.63 wind 9.0 270 < th dose independent rect. 17 21