Os04g0509100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipase, class 3 family protein.
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Os04g0509100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipase, class 3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.35 | 0.333 | 10.6 | 0.00357 | 0.974 | -0.812 | 0.471 | 1.37 | -0.0539 | 8.51 | 20.3 | 1797 | -- | -- |
| 52.37 | 0.337 | 10.6 | -0.0979 | 0.996 | -1.05 | 0.37 | -- | -0.102 | 8.36 | 19.4 | 2816 | -- | -- |
| 51.02 | 0.333 | 10.6 | 0.0125 | 0.973 | -0.822 | -- | 1.35 | -0.0547 | 8.51 | 20.3 | 1767 | -- | -- |
| 52.32 | 0.337 | 10.6 | -0.0726 | 1.01 | -1.21 | -- | -- | -0.0997 | 8.33 | 19.1 | 2877 | -- | -- |
| 101.7 | 0.47 | 10.6 | 0.0415 | -- | -0.874 | -- | 1.3 | -0.00778 | -- | 20.49 | 2149 | -- | -- |
| 73.94 | 0.403 | 10.7 | -0.666 | 0.98 | -- | 0.539 | -- | -0.326 | 8.51 | -- | -- | -- | -- |
| 74.87 | 0.405 | 10.7 | -0.65 | 0.979 | -- | -- | -- | -0.326 | 8.5 | -- | -- | -- | -- |
| 101.75 | 0.47 | 10.6 | -0.105 | -- | -1.22 | -- | -- | -0.0798 | -- | 19.13 | 2106 | -- | -- |
| 52.32 | 0.337 | 10.6 | -- | 0.987 | -1.23 | -- | -- | -0.0799 | 8.38 | 19 | 2882 | -- | -- |
| 128.55 | 0.53 | 10.7 | -0.645 | -- | -- | -- | -- | -0.316 | -- | -- | -- | -- | -- |
| 85.99 | 0.434 | 10.6 | -- | 0.977 | -- | -- | -- | -0.253 | 8.55 | -- | -- | -- | -- |
| 101.89 | 0.47 | 10.6 | -- | -- | -1.28 | -- | -- | -0.0572 | -- | 19.1 | 2120 | -- | -- |
| 139.53 | 0.551 | 10.7 | -- | -- | -- | -- | -- | -0.245 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 2 | 47.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 8 | 48.96 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 9 | 49.07 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 12 |
| 12 | 49.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 16 | 49.18 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 12 |
| 40 | 49.46 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 51 | 49.50 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 58 | 49.53 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 97 | 49.82 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 7 |
| 119 | 49.97 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 2 |
| 131 | 50.03 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 148 | 50.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 2 |
| 196 | 50.34 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 209 | 50.41 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 251 | 50.57 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 357 | 50.93 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 12 |
| 358 | 50.93 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 20 |
| 385 | 51.01 | humidity | 90 | 14400 | > th | dose dependent | sin | 3 | NA |
| 423 | 51.10 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 426 | 51.10 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 17 |
| 462 | 51.16 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 17 |
| 548 | 51.34 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 611 | 51.43 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 21 |
| 651 | 51.49 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 652 | 51.49 | radiation | 30 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 653 | 51.49 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 663 | 51.49 | radiation | 1 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 673 | 51.50 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 679 | 51.51 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 702 | 51.54 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 708 | 51.55 | humidity | 90 | 14400 | > th | dose dependent | rect. | 10 | 22 |
| 720 | 51.57 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 19 |
| 722 | 51.57 | humidity | 90 | 14400 | > th | dose independent | rect. | 10 | 21 |
| 728 | 51.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 8 |
| 730 | 51.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 11 |
| 742 | 51.60 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 16 |
| 757 | 51.62 | humidity | 90 | 14400 | < th | dose independent | sin | 7 | NA |
| 769 | 51.63 | humidity | 90 | 14400 | < th | dose independent | rect. | 13 | 18 |
| 789 | 51.65 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 821 | 51.67 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 822 | 51.68 | humidity | 90 | 14400 | > th | dose independent | sin | 6 | NA |
| 826 | 51.68 | humidity | 90 | 14400 | < th | dose independent | rect. | 13 | 15 |
| 833 | 51.68 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 837 | 51.69 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 846 | 51.69 | humidity | 90 | 14400 | > th | dose dependent | rect. | 16 | 23 |
| 856 | 51.70 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 6 |
| 860 | 51.71 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 880 | 51.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 7 |
| 885 | 51.73 | radiation | 1 | 14400 | > th | dose independent | sin | 11 | NA |
| 906 | 51.75 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 930 | 51.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 945 | 51.77 | wind | 1 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 961 | 51.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 977 | 51.80 | radiation | 1 | 14400 | < th | dose independent | sin | 10 | NA |
| 992 | 51.81 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 10 |
| 996 | 51.82 | humidity | 90 | 14400 | < th | dose independent | sin | 12 | NA |