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Os04g0504700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0241) R2 : 0.000762
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0299 (0.0507) R2dN8 : 0.000984 R2N8 : 0.000762
σ : 0.454
deviance : 94.42
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
59.23 0.362 12.5 0.739 1.16 -1.43 0.479 1.2 0.0574 5.66 0.8504 811 -- --
59.19 0.358 12.5 0.757 1.14 -1.44 1.31 -- 0.0557 5.92 0.6034 858 -- --
59.32 0.359 12.5 0.718 1.15 -1.42 -- 1.8 0.0514 5.65 0.9001 810 -- --
62.97 0.37 12.5 0.756 1.14 -1.59 -- -- 0.0533 6.42 0.739 921 -- --
65.71 0.378 12.5 0.833 -- 0.106 -- 1.88 0.109 -- 4.338e-05 747 -- --
65.86 0.38 12.5 0.935 0.233 -- 0.936 -- 0.132 4.2 -- -- -- --
67.4 0.384 12.5 0.924 0.259 -- -- -- 0.127 2.33 -- -- -- --
65.59 0.377 12.5 0.945 -- 0.397 -- -- 0.162 -- 45.66 360 -- --
75.39 0.404 12.5 -- 1.15 -1.97 -- -- -0.0399 7.58 9.058e-07 1044 -- --
71.38 0.395 12.5 0.935 -- -- -- -- 0.134 -- -- -- -- --
89.89 0.444 12.5 -- 0.277 -- -- -- 0.0244 2.39 -- -- -- --
77.98 0.411 12.6 -- -- -1.08 -- -- -0.0302 -- 0.009995 1355 -- --
94.42 0.454 12.5 -- -- -- -- -- 0.0299 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 56.98 humidity 70.0 10 > th dose dependent rect. 1 14
3 57.07 temperature 25.0 30 < th dose independent rect. 1 14
6 57.13 temperature 30.0 10 < th dose dependent rect. 1 18
9 57.23 temperature 30.0 10 < th dose dependent rect. 1 16
10 57.27 radiation 1.0 90 < th dose independent rect. 1 13
14 57.31 radiation 1.0 90 < th dose dependent rect. 1 13
23 57.49 humidity 70.0 10 > th dose dependent rect. 1 11
37 57.69 humidity 50.0 10 > th dose dependent rect. 1 16
41 57.73 humidity 50.0 270 > th dose independent rect. 11 6
50 57.81 radiation 1.0 90 < th dose independent rect. 1 7
53 57.83 humidity 50.0 270 > th dose independent rect. 10 9
58 57.85 radiation 1.0 90 < th dose dependent rect. 1 7
76 57.98 humidity 70.0 10 > th dose dependent rect. 1 9
80 58.00 humidity 50.0 10 > th dose dependent rect. 1 18
82 58.02 wind 1.0 30 > th dose independent rect. 6 19
86 58.06 humidity 70.0 10 > th dose dependent sin 7 NA
90 58.08 radiation 20.0 30 < th dose dependent rect. 1 13
91 58.08 radiation 1.0 270 < th dose dependent rect. 23 15
92 58.09 radiation 20.0 30 < th dose dependent rect. 1 9
128 58.33 radiation 1.0 270 < th dose independent rect. 23 15
132 58.34 radiation 20.0 30 < th dose dependent rect. 1 16
137 58.36 radiation 1.0 270 < th dose dependent sin 8 NA
141 58.38 humidity 70.0 10 > th dose dependent rect. 1 7
144 58.39 precipitation 0.1 270 < th dose independent rect. 2 23
147 58.39 precipitation 0.1 270 < th dose dependent rect. 2 23
148 58.40 humidity 80.0 30 > th dose independent rect. 1 13
155 58.41 humidity 50.0 90 > th dose independent rect. 1 16
163 58.47 temperature 25.0 30 < th dose independent rect. 1 11
165 58.47 atmosphere 1015.0 270 < th dose dependent rect. 1 2
174 58.50 wind 5.0 10 < th dose independent rect. 6 19
193 58.55 radiation 30.0 270 < th dose independent rect. 5 19
217 58.60 atmosphere 1015.0 270 < th dose dependent rect. 24 4
254 58.67 precipitation 0.1 90 < th dose independent rect. 17 8
256 58.67 atmosphere 1015.0 10 < th dose dependent rect. 1 5
257 58.67 precipitation 0.1 90 < th dose dependent rect. 17 8
295 58.76 radiation 40.0 90 < th dose dependent rect. 8 17
306 58.79 radiation 1.0 270 < th dose independent sin 8 NA
309 58.79 precipitation 0.1 270 < th dose independent rect. 16 19
310 58.79 temperature 30.0 270 < th dose dependent rect. 1 2
313 58.79 precipitation 0.1 270 < th dose dependent rect. 16 19
320 58.81 wind 1.0 270 > th dose independent rect. 4 20
329 58.82 radiation 40.0 270 < th dose dependent rect. 5 19
330 58.83 temperature 30.0 90 < th dose dependent rect. 1 5
334 58.84 radiation 1.0 90 < th dose independent sin 4 NA
335 58.84 radiation 1.0 90 < th dose dependent sin 4 NA
338 58.85 temperature 10.0 90 > th dose independent rect. 17 8
339 58.85 radiation 20.0 90 < th dose independent rect. 17 8
342 58.85 temperature 10.0 90 > th dose independent rect. 1 16
343 58.85 atmosphere 1015.0 90 < th dose independent rect. 1 16
346 58.85 radiation 30.0 270 < th dose independent rect. 17 18
353 58.86 humidity 90.0 30 < th dose independent rect. 17 20
364 58.88 wind 9.0 90 < th dose independent rect. 17 8
393 58.92 humidity 60.0 30 > th dose dependent rect. 1 5
394 58.93 atmosphere 995.0 90 > th dose independent rect. 17 8
399 58.94 precipitation 0.1 90 < th dose independent rect. 6 19
404 58.94 precipitation 0.1 90 < th dose dependent rect. 6 19
405 58.95 wind 9.0 90 < th dose independent rect. 1 16
406 58.95 wind 1.0 270 > th dose independent rect. 17 17
411 58.96 wind 1.0 270 > th dose independent rect. 3 22
435 58.99 atmosphere 1015.0 270 < th dose dependent rect. 23 6
437 59.00 radiation 30.0 90 < th dose independent rect. 8 17
453 59.03 wind 9.0 4320 < th dose independent rect. 2 5
455 59.03 wind 1.0 270 > th dose independent rect. 16 19
459 59.04 wind 1.0 90 > th dose independent rect. 17 8
460 59.04 radiation 40.0 90 < th dose dependent rect. 17 8
465 59.05 wind 1.0 30 > th dose independent rect. 19 6
467 59.05 atmosphere 995.0 90 > th dose independent rect. 6 19
472 59.06 wind 5.0 10 < th dose independent rect. 10 15
499 59.09 precipitation 0.1 270 < th dose independent rect. 4 20
506 59.09 precipitation 0.1 270 < th dose dependent rect. 4 20
508 59.10 humidity 80.0 30 > th dose independent rect. 1 5
515 59.10 humidity 90.0 270 < th dose dependent rect. 17 7
535 59.13 wind 1.0 270 > th dose independent rect. 1 2
540 59.14 temperature 30.0 10 < th dose independent rect. 12 7
542 59.14 wind 9.0 90 < th dose independent rect. 6 19
546 59.15 radiation 40.0 10 < th dose independent rect. 19 17
550 59.16 atmosphere 1005.0 10 > th dose independent rect. 19 7
570 59.18 temperature 10.0 1440 > th dose independent rect. 2 5
573 59.18 temperature 30.0 1440 < th dose independent rect. 2 5
577 59.18 humidity 50.0 1440 > th dose independent rect. 2 5
582 59.18 atmosphere 995.0 1440 > th dose independent rect. 2 5
583 59.18 radiation 40.0 1440 < th dose independent rect. 2 5
587 59.18 temperature 10.0 1440 > th dose independent rect. 7 19
594 59.18 temperature 30.0 10 < th dose dependent rect. 1 11
596 59.19 wind 9.0 90 < th dose independent rect. 1 5
597 59.19 temperature 10.0 90 > th dose independent rect. 1 5
599 59.19 temperature 30.0 90 < th dose independent rect. 1 5
600 59.19 humidity 50.0 90 > th dose independent rect. 1 5
603 59.19 atmosphere 995.0 90 > th dose independent rect. 1 5
604 59.19 atmosphere 1010.0 90 < th dose independent rect. 1 5
606 59.19 radiation 20.0 90 < th dose independent rect. 1 5
610 59.19 humidity 80.0 30 > th dose independent rect. 1 11
611 59.19 wind 9.0 10 < th dose independent rect. 6 19
612 59.19 temperature 10.0 90 > th dose independent rect. 6 19
614 59.19 temperature 30.0 90 < th dose dependent rect. 1 10
659 59.23 temperature 30.0 270 < th dose independent rect. 19 15
660 59.23 humidity 50.0 10 > th dose independent rect. 6 19
664 59.24 temperature 25.0 30 < th dose independent sin 5 NA
683 59.25 temperature 30.0 10 < th dose dependent rect. 1 9
689 59.26 temperature 10.0 270 > th dose independent rect. 1 2
691 59.26 temperature 30.0 270 < th dose independent rect. 1 2
692 59.26 humidity 50.0 270 > th dose independent rect. 1 2
695 59.26 atmosphere 995.0 270 > th dose independent rect. 1 2
696 59.26 atmosphere 1010.0 270 < th dose independent rect. 1 2
698 59.26 radiation 1.0 270 < th dose independent rect. 1 2
704 59.26 temperature 10.0 270 > th dose independent rect. 3 22
706 59.26 radiation 1.0 270 < th dose dependent rect. 1 2
715 59.26 wind 9.0 10 < th dose dependent rect. 6 19
716 59.27 wind 9.0 270 < th dose independent rect. 1 2
725 59.28 precipitation 0.1 270 < th dose independent rect. 1 2
728 59.28 atmosphere 995.0 270 > th dose independent rect. 4 20
729 59.28 precipitation 0.1 270 < th dose dependent rect. 1 2
747 59.29 humidity 90.0 90 < th dose independent rect. 18 17
751 59.29 atmosphere 995.0 270 > th dose independent rect. 3 22
752 59.29 humidity 50.0 270 > th dose dependent rect. 1 1
757 59.30 humidity 50.0 90 > th dose independent rect. 17 8
783 59.32 precipitation 0.1 90 < th dose independent rect. 1 5
784 59.32 precipitation 0.1 270 < th dose independent rect. 11 5
786 59.32 precipitation 0.1 90 < th dose independent rect. 1 16
791 59.32 precipitation 0.1 90 < th dose dependent rect. 1 5
792 59.32 precipitation 0.1 270 < th dose dependent rect. 11 5
794 59.32 precipitation 0.1 90 < th dose dependent rect. 1 16
797 59.33 atmosphere 995.0 270 > th dose independent rect. 16 19
808 59.34 temperature 10.0 270 > th dose independent rect. 11 5
809 59.34 atmosphere 1015.0 270 < th dose independent rect. 11 5
814 59.34 temperature 10.0 270 > th dose independent rect. 16 19
836 59.35 humidity 50.0 10 > th dose independent rect. 17 8
842 59.35 temperature 10.0 270 > th dose independent rect. 4 20
856 59.36 precipitation 0.1 30 < th dose independent rect. 19 6
864 59.36 precipitation 0.1 30 < th dose dependent rect. 19 6
867 59.37 temperature 10.0 10 > th dose independent rect. 19 6
868 59.37 temperature 30.0 10 < th dose independent rect. 19 6
869 59.37 humidity 50.0 10 > th dose independent rect. 19 6
871 59.37 atmosphere 995.0 10 > th dose independent rect. 19 6
873 59.37 radiation 1.0 10 < th dose independent rect. 19 6
880 59.37 wind 9.0 270 < th dose independent rect. 17 18
881 59.37 temperature 10.0 10 > th dose independent rect. 1 18
884 59.37 atmosphere 1015.0 10 < th dose independent rect. 1 18
887 59.37 radiation 1.0 10 < th dose dependent rect. 19 6
907 59.38 humidity 50.0 270 > th dose independent rect. 21 22
912 59.39 wind 9.0 10 < th dose independent rect. 19 6
926 59.39 atmosphere 995.0 90 > th dose independent rect. 1 16
933 59.39 atmosphere 995.0 10 > th dose dependent rect. 19 6
975 59.42 wind 9.0 270 < th dose independent rect. 11 5
984 59.43 temperature 25.0 10 < th dose independent rect. 1 7