Os04g0500700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Hydroxyanthranilate hydroxycinnamoyltransferase 3.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0500700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Hydroxyanthranilate hydroxycinnamoyltransferase 3.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.26 | 0.399 | 11.4 | 1.44 | 1.25 | -1.21 | -0.141 | 0.737 | 0.675 | 7.66 | 23.92 | 617 | -- | -- |
| 72.08 | 0.395 | 11.4 | 1.31 | 1.25 | -1.17 | -0.255 | -- | 0.64 | 7.81 | 23.96 | 557 | -- | -- |
| 71.98 | 0.395 | 11.4 | 1.43 | 1.24 | -1.22 | -- | 0.838 | 0.681 | 7.83 | 23.97 | 561 | -- | -- |
| 72.23 | 0.396 | 11.4 | 1.29 | 1.26 | -1.15 | -- | -- | 0.645 | 7.86 | 23.81 | 542 | -- | -- |
| 124.57 | 0.52 | 11.3 | 2.07 | -- | -2.44 | -- | 3.75 | 0.879 | -- | 24.49 | 575 | -- | -- |
| 96.89 | 0.461 | 11.4 | 1.06 | 1.74 | -- | 0.124 | -- | 0.504 | 7.54 | -- | -- | -- | -- |
| 96.93 | 0.461 | 11.4 | 1.06 | 1.74 | -- | -- | -- | 0.504 | 7.54 | -- | -- | -- | -- |
| 129.45 | 0.53 | 11.4 | 1.49 | -- | -2.13 | -- | -- | 0.731 | -- | 24.4 | 569 | -- | -- |
| 112.18 | 0.493 | 11.5 | -- | 1.44 | -0.876 | -- | -- | 0.366 | 7.78 | 27.5 | 520 | -- | -- |
| 259.19 | 0.752 | 11.5 | 1.09 | -- | -- | -- | -- | 0.531 | -- | -- | -- | -- | -- |
| 126.51 | 0.526 | 11.4 | -- | 1.75 | -- | -- | -- | 0.386 | 7.5 | -- | -- | -- | -- |
| 185.55 | 0.634 | 11.5 | -- | -- | -1.88 | -- | -- | 0.527 | -- | 24.7 | 552 | -- | -- |
| 290.24 | 0.795 | 11.5 | -- | -- | -- | -- | -- | 0.411 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.06 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 2 | 63.16 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 4 |
| 12 | 64.85 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 13 | 64.96 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 15 | 65.00 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 14 | 13 |
| 18 | 65.15 | temperature | 25.0 | 90 | > th | dose independent | rect. | 16 | 4 |
| 29 | 65.65 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 14 | 18 |
| 54 | 66.10 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 16 | 14 |
| 85 | 66.61 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 146 | 67.74 | temperature | 10.0 | 270 | > th | dose dependent | sin | 18 | NA |
| 165 | 67.99 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 16 | 9 |
| 168 | 68.08 | temperature | 20.0 | 270 | > th | dose dependent | sin | 17 | NA |
| 220 | 68.77 | radiation | 10.0 | 270 | > th | dose dependent | rect. | 16 | 15 |
| 236 | 69.04 | radiation | 10.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 241 | 69.09 | radiation | 10.0 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 430 | 70.37 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 18 |
| 432 | 70.42 | radiation | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 435 | 70.43 | radiation | 20.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 467 | 70.62 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 521 | 70.93 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 13 |
| 644 | 71.67 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 14 |
| 651 | 71.75 | temperature | 30.0 | 270 | < th | dose dependent | sin | 19 | NA |
| 659 | 71.80 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 22 |
| 683 | 72.02 | wind | 3.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 729 | 72.36 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 11 |
| 762 | 72.57 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 7 | 12 |
| 800 | 72.87 | radiation | 1.0 | 270 | > th | dose dependent | sin | 13 | NA |
| 802 | 72.87 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 22 | 21 |
| 824 | 73.00 | humidity | 90.0 | 90 | < th | dose independent | rect. | 16 | 3 |
| 932 | 73.46 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 16 | 3 |
| 933 | 73.46 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 16 | 3 |
| 937 | 73.47 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 949 | 73.53 | wind | 7.0 | 90 | < th | dose independent | rect. | 16 | 3 |
| 956 | 73.55 | wind | 3.0 | 270 | > th | dose independent | rect. | 14 | 4 |