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Os04g0500200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.46 (0.0357) R2 : 0.714
β1 : 1.76 (0.131) R2dD : 0.116 R2D : 0.0812
β2 : 1.78 (0.109) R2dC : 0.248 R2C : 0.456
β3 : -1.27 (0.0984) R2dE : 0.156 R2E : 0.36
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.324 (0.0764) R2dN8 : 0.0157 R2N8 : -0.011
σ : 0.668
deviance : 205.41
__
_____
C
peak time of C : 15.5
E
wheather : wind
threshold : 4.601
memory length : 94
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3
open length of G : 5.13

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
200.7 0.666 9.47 1.68 1.78 -1.25 0.527 -0.881 0.309 15.5 4.608 93 3.03 5.13
202.56 0.663 9.47 1.71 1.78 -1.24 0.984 -- 0.301 15.6 4.661 92 2.98 5.18
201.31 0.661 9.46 1.67 1.77 -1.27 -- -1.14 0.31 15.5 4.7 94 3.03 5.11
205.41 0.668 9.46 1.76 1.78 -1.27 -- -- 0.324 15.5 4.601 94 3 5.13
312.39 0.823 9.44 1.65 -- -2.02 -- -1.09 0.348 -- 21.27 69 2.4 6
251.67 0.744 9.5 1.66 2.7 -- 1.61 -- 0.248 16.4 -- -- -- --
258.63 0.753 9.5 1.67 2.71 -- -- -- 0.256 16.4 -- -- -- --
288.83 0.792 9.49 1.76 -- -2.38 -- -- 0.296 -- 15.46 277 0.0167 6.1
285.71 0.787 9.5 -- 1.76 -1.23 -- -- 0.169 15.4 4.7 92 3.05 5.33
653.43 1.19 9.48 1.56 -- -- -- -- 0.184 -- -- -- -- --
332.22 0.853 9.54 -- 2.68 -- -- -- 0.0701 16.4 -- -- -- --
366.95 0.892 9.48 -- -- -2.3 -- -- 0.17 -- 19.14 262 0.000909 6.42
717.96 1.25 9.52 -- -- -- -- -- 0.0109 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 201.13 wind 5.0 90 < th dose independent rect. 3 5
2 201.58 precipitation 0.1 90 < th dose independent rect. 3 5
3 201.58 precipitation 0.1 90 < th dose dependent rect. 3 5
4 202.09 wind 5.0 270 < th dose independent rect. 3 2
5 202.10 temperature 30.0 270 < th dose dependent rect. 3 2
6 202.65 precipitation 0.1 270 < th dose independent rect. 3 2
7 202.65 precipitation 0.1 270 < th dose dependent rect. 3 2
9 203.06 temperature 30.0 90 < th dose dependent rect. 3 5
10 203.39 wind 9.0 90 < th dose independent rect. 8 19
12 203.43 temperature 10.0 90 > th dose independent rect. 3 5
14 203.43 temperature 30.0 90 < th dose independent rect. 3 5
15 203.43 humidity 50.0 90 > th dose independent rect. 3 5
17 203.43 atmosphere 995.0 90 > th dose independent rect. 3 5
18 203.43 atmosphere 1015.0 90 < th dose independent rect. 3 5
19 203.43 temperature 10.0 90 > th dose independent rect. 8 19
20 203.54 radiation 40.0 90 < th dose independent rect. 3 5
23 204.52 precipitation 0.1 90 < th dose independent rect. 8 19
24 204.52 precipitation 0.1 90 < th dose dependent rect. 8 19
26 204.81 atmosphere 1005.0 90 > th dose independent rect. 3 5
29 205.27 wind 9.0 90 < th dose dependent rect. 3 5
32 205.41 wind 9.0 270 < th dose independent rect. 5 22
34 205.63 temperature 10.0 270 > th dose independent rect. 3 2
36 205.63 temperature 30.0 270 < th dose independent rect. 3 2
37 205.63 humidity 50.0 270 > th dose independent rect. 3 2
40 205.63 atmosphere 995.0 270 > th dose independent rect. 3 2
41 205.63 atmosphere 1010.0 270 < th dose independent rect. 3 2
43 205.63 radiation 20.0 270 < th dose independent rect. 3 2
46 205.63 temperature 10.0 270 > th dose independent rect. 5 22
48 205.66 radiation 1.0 270 < th dose dependent rect. 3 2
49 205.67 radiation 40.0 270 < th dose dependent rect. 3 2
51 205.71 wind 9.0 270 < th dose dependent rect. 3 2
54 205.82 radiation 1.0 270 < th dose independent rect. 3 2
56 205.87 wind 5.0 270 < th dose independent rect. 1 6
60 206.67 precipitation 0.1 10 < th dose independent rect. 3 6
61 206.67 precipitation 0.1 10 < th dose dependent rect. 3 6
63 206.79 atmosphere 995.0 90 > th dose independent rect. 8 19
65 207.23 atmosphere 1005.0 270 > th dose independent rect. 3 2
69 207.26 radiation 40.0 90 < th dose dependent rect. 3 6
73 207.55 radiation 30.0 90 < th dose independent rect. 3 8
85 207.95 radiation 40.0 90 < th dose independent rect. 3 16
89 208.12 wind 1.0 270 > th dose independent rect. 3 1
92 208.15 radiation 40.0 90 < th dose dependent rect. 3 8
95 208.50 temperature 30.0 10 < th dose dependent rect. 4 5
107 209.19 precipitation 0.1 270 < th dose independent rect. 1 6
108 209.19 precipitation 0.1 270 < th dose dependent rect. 1 6
111 209.26 radiation 20.0 270 < th dose independent rect. 1 7
115 209.36 atmosphere 995.0 90 > th dose dependent rect. 3 5
124 209.49 humidity 50.0 90 > th dose dependent rect. 19 8
125 209.50 radiation 30.0 270 < th dose dependent rect. 1 7
126 209.63 temperature 10.0 90 > th dose dependent rect. 8 19
130 209.71 precipitation 0.1 10 < th dose independent rect. 9 18
131 209.71 wind 9.0 270 < th dose independent rect. 6 20
132 209.71 precipitation 0.1 10 < th dose dependent rect. 9 18
139 209.75 atmosphere 1000.0 90 > th dose independent rect. 19 8
182 210.01 temperature 10.0 270 > th dose independent rect. 6 20
207 210.22 wind 9.0 10 < th dose dependent rect. 3 6
210 210.24 precipitation 0.1 270 < th dose independent rect. 13 17
211 210.24 precipitation 0.1 270 < th dose dependent rect. 13 17
248 210.38 precipitation 0.1 270 < th dose independent rect. 2 15
249 210.38 precipitation 0.1 270 < th dose dependent rect. 2 15
260 210.55 radiation 40.0 90 < th dose independent rect. 13 19
287 210.77 humidity 50.0 270 > th dose dependent rect. 3 2
294 210.85 temperature 15.0 270 > th dose independent rect. 13 17
309 211.04 humidity 70.0 270 > th dose independent rect. 1 6
311 211.06 temperature 10.0 270 > th dose independent rect. 1 6
313 211.06 temperature 30.0 270 < th dose independent rect. 1 6
314 211.06 humidity 50.0 270 > th dose independent rect. 1 6
316 211.06 atmosphere 995.0 270 > th dose independent rect. 1 6
317 211.06 atmosphere 1015.0 270 < th dose independent rect. 1 6
354 211.50 wind 9.0 270 < th dose independent rect. 6 7
357 211.51 temperature 10.0 270 > th dose independent rect. 6 7
358 211.51 atmosphere 995.0 270 > th dose independent rect. 6 7
359 211.51 atmosphere 1015.0 270 < th dose independent rect. 6 7
362 211.52 precipitation 0.1 270 < th dose independent rect. 6 7
363 211.52 precipitation 0.1 270 < th dose dependent rect. 6 7
370 211.67 radiation 40.0 10 < th dose independent rect. 4 16
374 211.71 humidity 50.0 90 > th dose dependent rect. 3 5
375 211.73 humidity 50.0 270 > th dose independent rect. 6 7
377 211.75 precipitation 0.1 90 < th dose independent rect. 8 6
378 211.75 precipitation 0.1 90 < th dose dependent rect. 8 6
382 211.77 wind 9.0 270 < th dose dependent rect. 1 6
396 211.89 wind 1.0 270 > th dose independent rect. 1 6
397 211.91 atmosphere 1005.0 270 > th dose independent rect. 1 6
410 211.94 wind 1.0 270 > th dose independent rect. 2 4
413 211.95 precipitation 0.1 270 < th dose independent rect. 5 22
414 211.95 precipitation 0.1 270 < th dose dependent rect. 5 22
416 211.96 wind 9.0 270 < th dose independent rect. 13 17
422 212.03 wind 9.0 1440 < th dose independent rect. 4 5
423 212.03 temperature 10.0 1440 > th dose independent rect. 4 5
426 212.03 humidity 50.0 1440 > th dose independent rect. 4 5
428 212.03 atmosphere 995.0 1440 > th dose independent rect. 4 5
429 212.03 atmosphere 1015.0 1440 < th dose independent rect. 4 5
430 212.03 temperature 10.0 1440 > th dose independent rect. 9 19
436 212.07 atmosphere 1015.0 90 < th dose independent rect. 8 19
445 212.15 temperature 10.0 90 > th dose independent rect. 8 6
446 212.15 atmosphere 995.0 90 > th dose independent rect. 8 6
447 212.15 atmosphere 1015.0 90 < th dose independent rect. 8 6
453 212.16 precipitation 0.1 270 < th dose independent rect. 10 22
455 212.16 precipitation 0.1 270 < th dose dependent rect. 10 22
456 212.17 temperature 15.0 270 > th dose independent rect. 2 15
479 212.23 atmosphere 995.0 270 > th dose dependent rect. 3 2
496 212.40 temperature 10.0 90 > th dose dependent rect. 3 5
499 212.43 wind 9.0 270 < th dose independent rect. 17 9
504 212.45 temperature 10.0 270 > th dose independent rect. 17 9
505 212.45 radiation 20.0 270 < th dose independent rect. 17 9
509 212.45 atmosphere 1015.0 270 < th dose independent rect. 2 15
528 212.49 wind 1.0 90 > th dose independent rect. 8 6
575 212.71 precipitation 0.1 270 < th dose independent rect. 6 20
578 212.71 precipitation 0.1 270 < th dose dependent rect. 6 20
588 212.78 wind 9.0 90 < th dose independent rect. 8 6
592 212.80 radiation 40.0 270 < th dose dependent rect. 17 9
605 212.87 atmosphere 995.0 270 > th dose independent rect. 17 9
609 212.92 temperature 10.0 270 > th dose dependent rect. 6 6
614 212.97 radiation 1.0 90 > th dose independent rect. 8 6
616 212.97 temperature 15.0 10 > th dose independent rect. 14 18
635 213.03 temperature 10.0 90 > th dose dependent rect. 8 6
667 213.20 precipitation 0.1 10 < th dose independent rect. 14 18
668 213.20 precipitation 0.1 10 < th dose dependent rect. 14 18
674 213.27 wind 9.0 270 < th dose independent rect. 2 15
675 213.29 precipitation 0.1 90 < th dose independent rect. 19 8
676 213.29 precipitation 0.1 90 < th dose dependent rect. 19 8
677 213.30 temperature 10.0 270 > th dose dependent rect. 8 2
705 213.46 wind 9.0 90 < th dose independent rect. 19 8
709 213.47 humidity 50.0 90 > th dose independent rect. 8 19
720 213.52 temperature 10.0 90 > th dose independent rect. 19 8
721 213.52 temperature 30.0 90 < th dose independent rect. 19 8
722 213.52 humidity 50.0 90 > th dose independent rect. 19 8
725 213.52 radiation 1.0 90 < th dose independent rect. 19 8
733 213.52 radiation 1.0 90 < th dose dependent rect. 19 8
739 213.54 humidity 50.0 270 > th dose independent rect. 8 2
749 213.61 radiation 40.0 90 < th dose dependent rect. 3 16
750 213.62 atmosphere 1015.0 90 < th dose independent rect. 14 18
762 213.69 precipitation 0.1 270 < th dose independent rect. 8 2
763 213.69 precipitation 0.1 270 < th dose dependent rect. 8 2
764 213.70 temperature 10.0 270 > th dose independent rect. 8 2
765 213.70 atmosphere 995.0 270 > th dose independent rect. 8 2
766 213.70 atmosphere 1015.0 270 < th dose independent rect. 8 2
769 213.70 temperature 10.0 270 > th dose independent rect. 10 22
782 213.72 wind 9.0 270 < th dose independent rect. 8 2
784 213.72 humidity 50.0 90 > th dose independent rect. 8 6
789 213.73 humidity 50.0 270 > th dose independent rect. 17 9
790 213.74 temperature 15.0 270 > th dose independent rect. 11 10
805 213.86 wind 1.0 270 > th dose independent rect. 13 17
810 213.91 atmosphere 995.0 90 > th dose independent rect. 14 18
829 214.03 radiation 40.0 10 < th dose dependent rect. 4 5
831 214.05 atmosphere 1000.0 10 > th dose independent rect. 20 8
845 214.09 radiation 40.0 90 < th dose dependent rect. 3 14
865 214.20 atmosphere 995.0 270 > th dose independent rect. 6 20
867 214.21 temperature 10.0 10 > th dose independent rect. 8 6
870 214.21 atmosphere 995.0 10 > th dose independent rect. 8 6
871 214.21 atmosphere 1015.0 10 < th dose independent rect. 8 6
872 214.21 precipitation 0.1 10 < th dose independent rect. 8 6
876 214.21 precipitation 0.1 10 < th dose dependent rect. 8 6
882 214.24 temperature 10.0 270 > th dose dependent rect. 3 2
884 214.26 radiation 40.0 10 < th dose independent rect. 12 20
888 214.28 radiation 40.0 90 < th dose dependent rect. 3 10
891 214.30 wind 9.0 90 < th dose dependent rect. 8 19
895 214.32 radiation 40.0 90 < th dose dependent rect. 3 12
911 214.39 radiation 1.0 10 > th dose independent rect. 8 6
920 214.48 humidity 50.0 270 > th dose independent rect. 21 14
931 214.57 humidity 80.0 720 < th dose dependent rect. 20 1
934 214.59 precipitation 0.1 270 < th dose independent rect. 17 9
935 214.59 precipitation 0.1 270 < th dose dependent rect. 17 9
946 214.63 humidity 70.0 90 > th dose independent rect. 3 8
953 214.66 radiation 1.0 270 > th dose independent rect. 6 7
967 214.73 atmosphere 1015.0 270 < th dose independent rect. 11 10
988 214.82 temperature 10.0 270 > th dose independent rect. 21 14
989 214.82 atmosphere 995.0 270 > th dose independent rect. 21 14
998 214.84 temperature 10.0 10 > th dose dependent rect. 8 6