Os04g0497200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 9 protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0497200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Glycoside hydrolase, family 9 protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 216.89 | 0.692 | 9.15 | 1.58 | 0.247 | 1.07 | -1.05 | -2.86 | 0.241 | 13.8 | 91 | 10 | -- | -- |
| 225.88 | 0.7 | 9.15 | 1.64 | 0.247 | 1.03 | -2.43 | -- | 0.247 | 14.1 | 91 | 4 | -- | -- |
| 218.31 | 0.688 | 9.14 | 1.57 | 0.285 | 1.16 | -- | -3.77 | 0.226 | 11.7 | 91.05 | 5 | -- | -- |
| 247.16 | 0.732 | 9.15 | 1.57 | 0.276 | 1.01 | -- | -- | 0.251 | 12 | 89 | 5 | -- | -- |
| 220.63 | 0.692 | 9.16 | 1.52 | -- | 1.35 | -- | -3.95 | 0.215 | -- | 91.15 | 5 | -- | -- |
| 240.6 | 0.727 | 9.14 | 1.67 | 0.767 | -- | -2.21 | -- | 0.256 | 13.8 | -- | -- | -- | -- |
| 259.39 | 0.754 | 9.15 | 1.6 | 0.763 | -- | -- | -- | 0.242 | 13.5 | -- | -- | -- | -- |
| 250.42 | 0.737 | 9.15 | 1.56 | -- | 1.24 | -- | -- | 0.241 | -- | 89 | 5 | -- | -- |
| 312.04 | 0.823 | 9.18 | -- | 0.278 | 1.08 | -- | -- | 0.106 | 12.1 | 82 | 5 | -- | -- |
| 295.12 | 0.803 | 9.16 | 1.57 | -- | -- | -- | -- | 0.226 | -- | -- | -- | -- | -- |
| 327 | 0.846 | 9.19 | -- | 0.735 | -- | -- | -- | 0.064 | 13.4 | -- | -- | -- | -- |
| 314.5 | 0.826 | 9.19 | -- | -- | 1.28 | -- | -- | 0.0918 | -- | 87 | 5 | -- | -- |
| 360.25 | 0.886 | 9.19 | -- | -- | -- | -- | -- | 0.0516 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 207.01 | humidity | 70 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 4 | 207.90 | humidity | 80 | 270 | > th | dose independent | sin | 3 | NA |
| 5 | 208.02 | humidity | 90 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 6 | 208.02 | humidity | 90 | 10 | < th | dose dependent | rect. | 20 | 22 |
| 12 | 208.59 | humidity | 80 | 270 | < th | dose independent | rect. | 6 | 9 |
| 15 | 208.76 | humidity | 90 | 10 | < th | dose dependent | sin | 0 | NA |
| 23 | 208.99 | humidity | 80 | 270 | < th | dose independent | sin | 3 | NA |
| 24 | 209.06 | humidity | 90 | 10 | < th | dose dependent | rect. | 22 | 20 |
| 31 | 209.27 | humidity | 90 | 10 | < th | dose dependent | rect. | 24 | 18 |
| 33 | 209.40 | humidity | 70 | 10 | > th | dose dependent | sin | 23 | NA |
| 42 | 209.61 | humidity | 80 | 270 | > th | dose independent | rect. | 1 | 13 |
| 54 | 209.93 | humidity | 90 | 10 | < th | dose dependent | rect. | 20 | 20 |
| 91 | 210.51 | humidity | 80 | 270 | > th | dose independent | rect. | 1 | 18 |
| 104 | 210.77 | humidity | 90 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 109 | 210.87 | humidity | 90 | 10 | < th | dose dependent | rect. | 9 | 9 |
| 142 | 211.15 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 10 |
| 188 | 211.82 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 8 |
| 202 | 211.99 | humidity | 80 | 30 | < th | dose independent | rect. | 9 | 9 |
| 208 | 212.08 | humidity | 90 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 268 | 212.67 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 270 | 212.68 | humidity | 80 | 270 | > th | dose independent | rect. | 5 | 14 |
| 305 | 213.09 | humidity | 80 | 270 | > th | dose dependent | rect. | 5 | 15 |
| 328 | 213.33 | humidity | 90 | 270 | < th | dose dependent | sin | 5 | NA |
| 432 | 214.14 | humidity | 80 | 30 | > th | dose independent | rect. | 7 | 13 |
| 450 | 214.32 | humidity | 50 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 479 | 214.48 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 535 | 214.76 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 551 | 214.83 | humidity | 90 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 574 | 215.01 | humidity | 90 | 10 | < th | dose dependent | rect. | 11 | 7 |
| 599 | 215.14 | humidity | 90 | 10 | < th | dose dependent | rect. | 11 | 5 |
| 626 | 215.33 | humidity | 80 | 30 | < th | dose independent | rect. | 11 | 7 |
| 660 | 215.49 | humidity | 70 | 270 | > th | dose dependent | rect. | 3 | 14 |
| 699 | 215.68 | humidity | 90 | 270 | < th | dose independent | rect. | 8 | 15 |
| 722 | 215.77 | humidity | 70 | 30 | < th | dose independent | rect. | 11 | 5 |
| 724 | 215.78 | humidity | 90 | 10 | < th | dose dependent | rect. | 5 | 20 |
| 737 | 215.88 | humidity | 70 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 751 | 215.94 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 795 | 216.13 | humidity | 70 | 10 | > th | dose independent | rect. | 1 | 13 |
| 809 | 216.17 | humidity | 70 | 270 | > th | dose dependent | rect. | 1 | 18 |
| 821 | 216.24 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 7 |
| 835 | 216.28 | humidity | 90 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 839 | 216.29 | humidity | 60 | 30 | > th | dose dependent | rect. | 1 | 19 |
| 847 | 216.32 | humidity | 70 | 270 | > th | dose dependent | rect. | 1 | 13 |
| 867 | 216.41 | humidity | 70 | 270 | > th | dose dependent | rect. | 23 | 20 |
| 877 | 216.46 | humidity | 50 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 881 | 216.47 | humidity | 50 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 935 | 216.69 | humidity | 70 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 996 | 216.87 | radiation | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 999 | 216.89 | humidity | 70 | 30 | < th | dose independent | rect. | 11 | 3 |