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Os04g0495700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.56 (0.0275) R2 : 0.619
β1 : -0.891 (0.101) R2dD : 0.0679 R2D : 0.0168
β2 : 1.56 (0.0664) R2dC : 0.46 R2C : 0.446
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.648 (0.0587) R2dN8 : 0.137 R2N8 : 0.0827
σ : 0.517
deviance : 121.92
__
_____
C
peak time of C : 13.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
110.68 0.494 6.59 -1.17 1.29 0.98 -0.0533 -1.65 -0.703 13.3 26.4 98 -- --
111.29 0.495 6.57 -1 1.29 0.862 -0.163 -- -0.672 13.5 26.4 98 -- --
110.38 0.493 6.59 -1.17 1.28 1.01 -- -1.88 -0.711 13.6 26.4 98 -- --
111.4 0.495 6.57 -1 1.3 0.849 -- -- -0.673 13.5 26.4 98 -- --
176.44 0.619 6.67 -1.46 -- 2.06 -- -2.03 -0.947 -- 24.6 12 -- --
121.89 0.518 6.57 -0.894 1.56 -- 0.0955 -- -0.649 13.8 -- -- -- --
121.92 0.517 6.56 -0.891 1.56 -- -- -- -0.648 13.8 -- -- -- --
179.06 0.623 6.63 -1.23 -- 1.9 -- -- -0.868 -- 24.5 12 -- --
137.13 0.548 6.54 -- 1.39 0.616 -- -- -0.552 13.6 26.7 121 -- --
268.9 0.766 6.58 -0.954 -- -- -- -- -0.684 -- -- -- -- --
142.83 0.559 6.54 -- 1.57 -- -- -- -0.549 13.8 -- -- -- --
217.73 0.689 6.59 -- -- 1.76 -- -- -0.703 -- 24.6 10 -- --
292.91 0.799 6.56 -- -- -- -- -- -0.578 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 104.99 temperature 30.0 270 < th dose independent rect. 24 20
4 105.72 temperature 30.0 720 < th dose independent rect. 9 3
5 105.79 atmosphere 1000.0 10 > th dose dependent rect. 15 8
18 107.05 temperature 30.0 270 < th dose independent rect. 10 10
26 107.48 temperature 30.0 720 < th dose independent rect. 24 12
33 107.74 temperature 30.0 720 < th dose independent rect. 11 1
43 108.00 temperature 30.0 10 < th dose independent rect. 11 10
54 108.13 temperature 30.0 10 < th dose independent rect. 11 12
59 108.24 temperature 30.0 270 < th dose independent rect. 13 7
73 108.78 atmosphere 1005.0 10 > th dose independent rect. 15 8
74 108.80 atmosphere 1005.0 270 > th dose independent rect. 14 6
84 108.96 temperature 30.0 90 < th dose dependent rect. 14 7
87 109.07 temperature 30.0 270 < th dose independent rect. 15 14
88 109.09 temperature 30.0 720 < th dose independent rect. 5 7
98 109.25 temperature 30.0 270 < th dose independent rect. 15 4
106 109.35 wind 7.0 30 < th dose independent rect. 12 14
110 109.38 atmosphere 1005.0 270 > th dose independent rect. 16 3
112 109.40 atmosphere 1005.0 270 > th dose dependent rect. 16 3
128 109.56 temperature 30.0 10 < th dose independent rect. 2 21
151 109.79 atmosphere 995.0 720 > th dose independent rect. 24 21
154 109.81 temperature 30.0 10 < th dose independent rect. 24 23
158 109.86 temperature 30.0 720 < th dose independent rect. 21 18
159 109.87 temperature 30.0 720 < th dose independent rect. 19 17
162 109.92 atmosphere 1005.0 10 > th dose independent rect. 15 6
170 109.99 temperature 30.0 720 < th dose independent sin 5 NA
179 110.09 atmosphere 1005.0 90 > th dose dependent rect. 18 4
180 110.09 humidity 50.0 90 > th dose dependent rect. 15 6
196 110.22 atmosphere 1010.0 270 < th dose independent rect. 15 13
197 110.23 humidity 70.0 90 > th dose independent rect. 14 7
199 110.24 temperature 30.0 720 > th dose independent rect. 8 6
215 110.27 radiation 1.0 30 < th dose dependent rect. 11 10
221 110.29 radiation 1.0 30 < th dose dependent rect. 13 8
228 110.34 radiation 30.0 720 < th dose independent rect. 15 6
229 110.35 radiation 1.0 30 > th dose independent sin 23 NA
232 110.36 temperature 10.0 10 > th dose dependent rect. 12 14
237 110.40 wind 7.0 720 < th dose independent rect. 21 3
238 110.40 atmosphere 1000.0 720 > th dose independent rect. 9 3
241 110.40 radiation 1.0 30 < th dose dependent rect. 15 6
247 110.42 temperature 10.0 270 > th dose dependent rect. 4 11
254 110.49 temperature 15.0 720 > th dose dependent rect. 12 1
258 110.51 temperature 30.0 720 < th dose independent rect. 3 8
260 110.52 precipitation 0.1 10 < th dose independent rect. 12 14
268 110.52 precipitation 0.1 10 < th dose dependent rect. 12 14
273 110.53 wind 9.0 720 < th dose independent rect. 12 21
281 110.56 radiation 1.0 30 < th dose independent rect. 11 10
286 110.58 radiation 1.0 30 < th dose independent rect. 13 8
289 110.58 radiation 1.0 30 < th dose independent rect. 2 21
298 110.61 temperature 25.0 10 > th dose dependent rect. 12 23
300 110.62 atmosphere 1000.0 270 > th dose independent rect. 15 14
302 110.64 radiation 1.0 720 > th dose independent rect. 9 3
304 110.64 wind 9.0 10 < th dose independent rect. 2 10
317 110.67 radiation 1.0 90 < th dose independent rect. 24 23
321 110.69 radiation 1.0 30 < th dose independent rect. 6 15
324 110.70 radiation 1.0 30 < th dose independent rect. 15 6
327 110.70 temperature 25.0 10 > th dose dependent rect. 8 12
328 110.70 temperature 10.0 270 > th dose dependent rect. 9 15
330 110.71 temperature 15.0 720 > th dose independent rect. 9 3
331 110.71 temperature 30.0 720 > th dose independent rect. 11 3
339 110.72 temperature 25.0 270 > th dose dependent sin 3 NA
344 110.73 temperature 30.0 10 < th dose dependent rect. 12 9
351 110.76 temperature 30.0 10 < th dose dependent rect. 14 9
362 110.81 atmosphere 1000.0 10 > th dose independent rect. 11 12
371 110.84 humidity 50.0 270 > th dose independent rect. 15 14
377 110.86 atmosphere 1005.0 10 > th dose dependent rect. 18 5
379 110.87 temperature 10.0 10 > th dose independent rect. 2 10
381 110.87 atmosphere 995.0 10 > th dose independent rect. 2 10
382 110.87 atmosphere 1015.0 10 < th dose independent rect. 2 10
383 110.87 temperature 10.0 10 > th dose independent rect. 12 14
385 110.87 humidity 50.0 720 > th dose dependent rect. 21 3
393 110.89 temperature 10.0 720 > th dose dependent rect. 3 6
398 110.92 wind 1.0 720 > th dose independent rect. 9 3
399 110.92 radiation 10.0 30 < th dose dependent rect. 24 23
402 110.94 atmosphere 1000.0 270 > th dose independent rect. 8 12
412 110.98 radiation 1.0 720 < th dose dependent rect. 24 8
413 110.99 atmosphere 1010.0 720 < th dose independent rect. 15 6
415 110.99 temperature 25.0 10 > th dose dependent rect. 1 19
418 111.00 temperature 10.0 10 > th dose dependent sin 21 NA
422 111.02 temperature 25.0 90 > th dose dependent sin 0 NA
424 111.02 temperature 25.0 10 > th dose dependent rect. 3 17
439 111.04 temperature 25.0 10 > th dose dependent rect. 21 23
440 111.05 precipitation 0.1 720 < th dose independent rect. 9 3
441 111.05 radiation 40.0 720 < th dose independent rect. 19 14
442 111.05 precipitation 0.1 720 < th dose dependent rect. 9 3
445 111.06 precipitation 0.1 30 < th dose independent rect. 2 10
446 111.06 precipitation 0.1 30 < th dose dependent rect. 2 10
447 111.07 wind 1.0 30 > th dose independent rect. 23 16
450 111.07 temperature 25.0 10 > th dose dependent rect. 23 21
451 111.07 radiation 10.0 30 < th dose dependent rect. 2 21
455 111.08 temperature 15.0 270 > th dose dependent rect. 6 18
463 111.11 precipitation 0.1 720 < th dose independent rect. 24 21
464 111.11 atmosphere 1005.0 10 > th dose dependent rect. 18 3
465 111.11 temperature 25.0 10 > th dose dependent rect. 6 14
467 111.11 precipitation 0.1 720 < th dose dependent rect. 24 21
477 111.15 temperature 10.0 1440 > th dose independent rect. 3 10
480 111.15 atmosphere 995.0 1440 > th dose independent rect. 3 10
482 111.15 temperature 10.0 1440 > th dose independent rect. 13 14
490 111.16 wind 9.0 720 < th dose independent rect. 9 3
492 111.16 temperature 10.0 720 > th dose dependent rect. 12 3
496 111.17 atmosphere 1015.0 720 < th dose independent rect. 9 3
497 111.17 temperature 10.0 720 > th dose independent rect. 12 21
499 111.18 wind 1.0 720 > th dose independent rect. 21 3
501 111.18 atmosphere 1000.0 90 > th dose independent rect. 11 10
506 111.19 temperature 10.0 720 > th dose independent rect. 21 3
507 111.19 temperature 30.0 720 < th dose independent rect. 21 3
508 111.19 humidity 50.0 720 > th dose independent rect. 21 3
511 111.19 atmosphere 995.0 720 > th dose independent rect. 21 3
512 111.19 radiation 1.0 720 < th dose independent rect. 21 3
517 111.19 temperature 10.0 720 > th dose independent rect. 24 21
519 111.19 radiation 1.0 720 < th dose dependent rect. 21 3
529 111.21 precipitation 0.1 720 < th dose independent rect. 21 3
530 111.21 humidity 90.0 720 < th dose dependent rect. 12 1
531 111.21 precipitation 0.1 720 < th dose dependent rect. 21 3
535 111.22 temperature 30.0 720 > th dose independent sin 6 NA
543 111.22 atmosphere 1000.0 720 > th dose independent rect. 9 18
556 111.25 radiation 1.0 30 > th dose independent rect. 6 12
596 111.28 humidity 70.0 270 > th dose independent rect. 17 2
605 111.29 humidity 50.0 720 > th dose independent rect. 9 3
607 111.29 radiation 40.0 720 < th dose independent rect. 3 6
608 111.29 atmosphere 1000.0 720 > th dose independent rect. 5 7
611 111.29 radiation 1.0 720 < th dose dependent rect. 24 12
613 111.30 temperature 30.0 270 < th dose independent sin 23 NA
618 111.30 radiation 1.0 10 < th dose dependent rect. 6 17
624 111.32 temperature 15.0 720 > th dose independent rect. 15 6
632 111.32 temperature 25.0 270 > th dose dependent rect. 17 22
655 111.36 humidity 70.0 10 > th dose independent rect. 14 9
656 111.36 atmosphere 1015.0 720 < th dose independent rect. 7 14
661 111.37 wind 7.0 270 < th dose independent rect. 12 12
676 111.41 radiation 20.0 270 < th dose independent rect. 15 14
680 111.41 radiation 40.0 270 < th dose dependent rect. 15 14
686 111.42 atmosphere 1000.0 30 > th dose independent rect. 24 23
707 111.45 temperature 25.0 30 > th dose dependent rect. 19 23
710 111.46 precipitation 0.1 720 < th dose independent rect. 12 21
711 111.46 precipitation 0.1 720 < th dose dependent rect. 12 21
713 111.49 atmosphere 995.0 720 > th dose independent rect. 15 6
719 111.49 radiation 1.0 10 < th dose independent rect. 6 17
730 111.50 temperature 30.0 10 < th dose dependent rect. 12 11
750 111.53 atmosphere 1015.0 720 < th dose independent rect. 9 18
757 111.54 wind 1.0 30 > th dose independent rect. 23 12
759 111.54 temperature 25.0 10 > th dose dependent sin 22 NA
763 111.55 humidity 50.0 10 > th dose independent rect. 23 16
764 111.55 atmosphere 1000.0 10 > th dose independent rect. 2 21
775 111.56 temperature 25.0 10 > th dose dependent rect. 8 23
780 111.57 temperature 25.0 270 > th dose dependent rect. 1 15
788 111.59 radiation 40.0 90 < th dose dependent rect. 14 7
796 111.60 temperature 25.0 270 > th dose dependent rect. 19 21
797 111.61 atmosphere 995.0 720 > th dose independent rect. 18 9
800 111.61 temperature 25.0 270 > th dose dependent rect. 6 10
807 111.62 temperature 30.0 270 < th dose dependent rect. 15 4
819 111.65 humidity 60.0 90 > th dose independent rect. 21 18
842 111.67 temperature 25.0 10 > th dose dependent rect. 17 23
849 111.69 temperature 30.0 30 < th dose independent rect. 2 10
857 111.70 temperature 15.0 720 > th dose independent rect. 17 19
875 111.72 temperature 25.0 270 > th dose dependent rect. 21 19
891 111.74 temperature 30.0 270 < th dose dependent rect. 24 19
899 111.76 atmosphere 1005.0 10 > th dose independent rect. 18 3
903 111.76 radiation 1.0 30 < th dose independent rect. 2 19
919 111.77 temperature 25.0 90 > th dose dependent rect. 8 16
923 111.78 radiation 1.0 720 < th dose independent rect. 24 7
924 111.78 temperature 30.0 720 < th dose independent rect. 17 22
938 111.79 wind 7.0 720 < th dose independent rect. 21 10
943 111.79 temperature 25.0 10 > th dose dependent rect. 8 16
944 111.79 temperature 25.0 10 > th dose dependent rect. 8 21
947 111.80 radiation 10.0 720 < th dose independent rect. 18 9
948 111.80 wind 5.0 30 < th dose independent rect. 21 14
950 111.80 radiation 40.0 270 < th dose independent rect. 20 17
966 111.81 radiation 40.0 10 < th dose dependent rect. 14 9
979 111.83 wind 9.0 720 < th dose independent rect. 21 18
985 111.83 temperature 25.0 90 > th dose dependent rect. 8 21
996 111.85 radiation 20.0 720 < th dose independent rect. 21 10