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Os04g0494400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0191) R2 : 0.694
β1 : -1.02 (0.0698) R2dD : 0.15 R2D : 0.186
β2 : 1.29 (0.0498) R2dC : 0.452 R2C : 0.434
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.37 (0.0407) R2dN8 : 0.0746 R2N8 : 0.0833
σ : 0.358
deviance : 58.55
__
_____
C
peak time of C : 17.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
49.98 0.332 12.3 -1.03 1.31 0.457 -0.14 -1.59 0.441 18.1 9.961 1331 -- --
52.77 0.338 12.3 -1.03 1.3 0.457 -0.0842 -- 0.445 18.2 29.88 1280 -- --
49.83 0.329 12.3 -1.02 1.31 0.457 -- -1.59 0.439 18.1 9.99 1296 -- --
52.07 0.336 12.3 -1 1.29 0.492 -- -- 0.473 18.2 38.3 1244 -- --
137.98 0.547 12.3 -1 -- 0.435 -- -1.59 0.439 -- 9.942 1379 -- --
58.52 0.359 12.3 -1.02 1.29 -- -0.123 -- 0.371 17.9 -- -- -- --
58.55 0.358 12.3 -1.02 1.29 -- -- -- 0.37 17.9 -- -- -- --
137.79 0.547 12.3 -1.02 -- 0.484 -- -- 0.435 -- 38.15 1354 -- --
75.64 0.405 12.3 -- 1.3 0.547 -- -- 0.567 18.1 32.85 1274 -- --
144.56 0.562 12.3 -1.06 -- -- -- -- 0.341 -- -- -- -- --
86.13 0.434 12.3 -- 1.3 -- -- -- 0.484 17.9 -- -- -- --
161.93 0.593 12.2 -- -- 0.521 -- -- 0.573 -- 30.85 1359 -- --
174.28 0.616 12.3 -- -- -- -- -- 0.458 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.64 temperature 15.0 270 > th dose dependent rect. 21 3
2 47.69 temperature 15.0 90 > th dose dependent rect. 21 6
3 47.93 temperature 15.0 270 > th dose dependent rect. 19 6
10 48.25 humidity 60.0 270 > th dose independent rect. 5 9
20 48.52 atmosphere 995.0 90 > th dose dependent rect. 15 15
25 48.78 radiation 40.0 90 < th dose dependent rect. 7 20
30 48.83 temperature 20.0 270 > th dose independent rect. 21 3
41 49.06 radiation 40.0 270 < th dose independent rect. 6 9
44 49.12 precipitation 0.1 270 < th dose independent rect. 15 14
45 49.12 precipitation 0.1 270 < th dose dependent rect. 15 14
47 49.15 temperature 20.0 270 > th dose independent rect. 20 5
61 49.29 atmosphere 995.0 10 > th dose dependent rect. 15 15
68 49.38 temperature 20.0 10 > th dose independent rect. 21 7
69 49.38 atmosphere 995.0 270 > th dose independent rect. 15 14
71 49.39 wind 7.0 43200 > th dose dependent rect. 11 1
74 49.42 atmosphere 995.0 270 > th dose independent rect. 5 10
79 49.44 temperature 10.0 270 > th dose independent rect. 5 10
80 49.44 atmosphere 1015.0 270 < th dose independent rect. 5 10
81 49.44 temperature 10.0 270 > th dose independent rect. 15 14
85 49.45 radiation 30.0 270 < th dose independent rect. 15 14
89 49.51 precipitation 0.1 270 < th dose independent rect. 5 10
90 49.51 precipitation 0.1 270 < th dose dependent rect. 5 10
91 49.51 temperature 30.0 90 < th dose dependent rect. 15 15
95 49.55 precipitation 0.1 90 < th dose independent rect. 3 18
96 49.55 precipitation 0.1 90 < th dose dependent rect. 3 18
98 49.56 wind 9.0 270 < th dose independent rect. 5 10
100 49.59 wind 9.0 43200 < th dose independent rect. 11 1
106 49.63 wind 9.0 270 < th dose independent rect. 15 14
110 49.65 wind 1.0 270 > th dose independent rect. 14 14
112 49.66 temperature 25.0 14400 > th dose independent rect. 12 1
117 49.69 radiation 40.0 270 < th dose independent rect. 11 14
118 49.69 precipitation 0.1 270 < th dose independent rect. 24 21
119 49.69 precipitation 0.1 270 < th dose dependent rect. 24 21
127 49.75 radiation 30.0 43200 > th dose independent rect. 11 1
130 49.76 wind 9.0 43200 > th dose independent rect. 11 1
131 49.76 wind 9.0 43200 < th dose independent rect. 10 3
134 49.77 radiation 20.0 43200 < th dose dependent rect. 12 1
135 49.80 humidity 90.0 14400 > th dose independent rect. 13 1
136 49.80 precipitation 0.1 14400 < th dose independent rect. 14 1
138 49.80 precipitation 0.1 14400 < th dose dependent rect. 14 1
144 49.81 radiation 40.0 270 < th dose dependent rect. 15 14
147 49.83 precipitation 0.1 270 < th dose independent rect. 1 16
148 49.83 precipitation 0.1 270 < th dose dependent rect. 1 16
153 49.85 radiation 40.0 90 < th dose dependent rect. 9 18
154 49.87 wind 9.0 43200 > th dose independent rect. 10 3
157 49.87 temperature 30.0 10 < th dose dependent rect. 16 15
176 49.95 temperature 25.0 14400 < th dose independent rect. 12 1
180 49.95 wind 9.0 90 < th dose dependent rect. 3 14
184 49.97 radiation 20.0 43200 > th dose independent rect. 9 5
190 49.99 radiation 20.0 43200 > th dose independent rect. 11 3
191 49.99 temperature 20.0 10 > th dose independent rect. 23 5
193 49.99 radiation 30.0 43200 < th dose dependent rect. 10 3
203 50.01 atmosphere 1015.0 90 < th dose independent rect. 21 6
206 50.01 radiation 40.0 270 < th dose dependent rect. 6 8
211 50.03 temperature 25.0 14400 < th dose independent rect. 10 3
224 50.05 temperature 30.0 270 < th dose dependent rect. 23 6
254 50.12 wind 1.0 14400 < th dose dependent rect. 19 9
261 50.13 temperature 10.0 270 > th dose dependent rect. 20 13
272 50.15 temperature 15.0 90 > th dose independent rect. 3 18
274 50.15 wind 1.0 14400 < th dose dependent rect. 21 5
275 50.15 wind 1.0 14400 < th dose dependent rect. 21 7
283 50.16 radiation 40.0 10 < th dose dependent rect. 9 17
286 50.17 temperature 30.0 90 < th dose independent rect. 21 6
287 50.17 humidity 50.0 90 > th dose independent rect. 21 6
290 50.17 atmosphere 995.0 90 > th dose independent rect. 21 6
291 50.17 radiation 1.0 90 < th dose independent rect. 21 6
299 50.17 atmosphere 1015.0 90 < th dose independent rect. 3 18
302 50.17 radiation 20.0 14400 < th dose dependent rect. 22 5
304 50.17 radiation 1.0 90 < th dose dependent rect. 21 6
312 50.18 wind 9.0 90 < th dose independent rect. 21 6
335 50.20 precipitation 0.1 90 < th dose independent rect. 21 6
338 50.20 precipitation 0.1 90 < th dose dependent rect. 21 6
347 50.22 atmosphere 1015.0 270 < th dose independent rect. 21 3
354 50.23 wind 9.0 14400 < th dose independent rect. 4 9
363 50.24 wind 5.0 90 < th dose independent rect. 17 10
368 50.24 atmosphere 1015.0 90 < th dose dependent rect. 21 6
379 50.26 radiation 40.0 43200 > th dose independent rect. 13 1
390 50.28 radiation 10.0 43200 > th dose independent rect. 7 2
393 50.28 radiation 20.0 90 < th dose independent rect. 7 20
397 50.28 temperature 10.0 270 > th dose dependent rect. 6 18
399 50.29 precipitation 0.1 90 < th dose independent rect. 3 14
401 50.29 precipitation 0.1 90 < th dose dependent rect. 3 14
411 50.31 wind 9.0 90 < th dose dependent rect. 17 10
420 50.34 temperature 20.0 10 > th dose independent rect. 23 16
427 50.35 wind 9.0 90 < th dose independent rect. 3 18
434 50.36 wind 7.0 270 < th dose independent rect. 17 8
436 50.36 wind 1.0 43200 > th dose dependent rect. 5 1
445 50.38 precipitation 0.1 14400 > th dose independent rect. 14 1
446 50.38 wind 1.0 270 > th dose independent rect. 21 2
449 50.38 precipitation 0.1 14400 > th dose dependent rect. 14 1
454 50.39 temperature 10.0 270 > th dose independent rect. 17 8
455 50.39 radiation 20.0 270 < th dose independent rect. 17 8
461 50.39 temperature 10.0 270 > th dose independent rect. 1 16
462 50.39 atmosphere 1015.0 270 < th dose independent rect. 1 16
479 50.40 atmosphere 1015.0 270 < th dose independent rect. 17 8
481 50.40 wind 9.0 43200 < th dose dependent rect. 5 1
488 50.41 atmosphere 1015.0 270 < th dose independent rect. 19 6
490 50.41 precipitation 0.1 270 < th dose independent rect. 17 8
493 50.41 precipitation 0.1 270 < th dose dependent rect. 17 8
505 50.44 precipitation 0.1 270 < th dose independent rect. 21 3
510 50.44 precipitation 0.1 270 < th dose dependent rect. 21 3
543 50.47 atmosphere 995.0 270 > th dose independent rect. 1 16
544 50.47 radiation 10.0 43200 > th dose independent rect. 17 17
546 50.47 humidity 50.0 90 > th dose dependent rect. 21 6
552 50.48 wind 9.0 270 < th dose independent rect. 1 16
561 50.48 radiation 40.0 270 < th dose dependent rect. 17 8
568 50.50 radiation 30.0 43200 < th dose independent rect. 11 1
569 50.50 wind 1.0 90 > th dose independent rect. 6 9
608 50.53 wind 1.0 43200 < th dose dependent rect. 5 2
612 50.53 radiation 40.0 270 < th dose dependent rect. 11 14
622 50.55 radiation 10.0 43200 > th dose independent sin 10 NA
665 50.57 temperature 30.0 270 < th dose independent rect. 21 3
666 50.57 humidity 50.0 270 > th dose independent rect. 21 3
669 50.57 atmosphere 995.0 270 > th dose independent rect. 21 3
670 50.57 radiation 1.0 270 < th dose independent rect. 21 3
679 50.57 temperature 10.0 270 > th dose independent rect. 24 21
680 50.57 radiation 1.0 270 < th dose dependent rect. 21 3
689 50.58 wind 9.0 270 < th dose independent rect. 21 3
704 50.59 humidity 50.0 270 > th dose independent rect. 18 7
732 50.60 humidity 50.0 270 > th dose independent rect. 14 11
735 50.60 radiation 1.0 270 < th dose independent rect. 5 20
736 50.60 atmosphere 995.0 270 > th dose independent rect. 24 21
766 50.63 radiation 20.0 1440 < th dose independent rect. 8 4
767 50.63 humidity 50.0 43200 > th dose independent rect. 22 6
769 50.63 atmosphere 1015.0 270 < th dose dependent rect. 21 3
796 50.64 radiation 20.0 1440 < th dose independent rect. 6 6
805 50.64 radiation 20.0 1440 < th dose independent rect. 24 12
832 50.65 radiation 20.0 1440 < th dose independent rect. 2 10
849 50.66 humidity 50.0 720 > th dose independent rect. 14 1
850 50.66 wind 1.0 43200 > th dose independent rect. 5 2
859 50.66 humidity 50.0 270 > th dose independent rect. 15 14
863 50.66 temperature 30.0 270 < th dose dependent rect. 1 4
892 50.68 radiation 1.0 270 < th dose dependent rect. 5 20
902 50.69 temperature 10.0 90 > th dose independent rect. 3 14
903 50.69 atmosphere 1015.0 90 < th dose independent rect. 3 14
908 50.70 radiation 20.0 720 < th dose independent rect. 5 4
921 50.71 temperature 30.0 270 < th dose independent rect. 19 6
924 50.71 atmosphere 995.0 270 > th dose independent rect. 19 6
944 50.72 wind 9.0 43200 > th dose independent rect. 9 6
976 50.73 humidity 50.0 10 > th dose independent rect. 6 9
989 50.73 wind 9.0 270 < th dose independent rect. 24 21
992 50.73 radiation 1.0 43200 > th dose dependent rect. 11 1
1000 50.74 humidity 50.0 720 > th dose independent rect. 14 3