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Os04g0490700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.29 (0.0201) R2 : 0.679
β1 : 1.84 (0.0735) R2dD : 0.459 R2D : 0.39
β2 : 0.968 (0.0522) R2dC : 0.243 R2C : 0.216
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.337 (0.0429) R2dN8 : 0.0585 R2N8 : -0.0154
σ : 0.377
deviance : 64.96
__
_____
C
peak time of C : 18.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
57.24 0.355 9.3 1.94 0.979 -0.573 0.614 -0.0962 0.318 19.3 82.13 1181 -- --
57.25 0.352 9.3 1.94 0.979 -0.578 0.599 -- 0.32 19.3 82.08 1185 -- --
58.19 0.355 9.3 1.92 0.97 -0.554 -- -0.07 0.321 19.2 82.44 1219 -- --
58.2 0.355 9.3 1.93 0.97 -0.558 -- -- 0.322 19.2 82 1210 -- --
105.38 0.478 9.28 1.88 -- -0.568 -- -0.352 0.315 -- 85.07 1353 -- --
64.32 0.376 9.29 1.85 0.966 -- 0.505 -- 0.336 18.8 -- -- -- --
64.96 0.377 9.29 1.84 0.968 -- -- -- 0.337 18.7 -- -- -- --
105.47 0.478 9.28 1.91 -- -0.593 -- -- 0.31 -- 85 1347 -- --
92.62 0.448 9.29 -- 1.26 -1.4 -- -- 0.159 18.9 68.92 30783 -- --
113.93 0.499 9.27 1.82 -- -- -- -- 0.318 -- -- -- -- --
154.54 0.582 9.34 -- 0.946 -- -- -- 0.132 18.9 -- -- -- --
134.17 0.539 9.31 -- -- -1.4 -- -- 0.16 -- 68.06 30109 -- --
201.46 0.663 9.32 -- -- -- -- -- 0.116 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.85 temperature 20.0 90 > th dose independent rect. 22 6
2 48.15 temperature 15.0 90 > th dose dependent rect. 22 6
3 48.40 temperature 15.0 10 > th dose dependent rect. 22 7
4 48.47 temperature 20.0 10 > th dose independent rect. 22 7
5 48.63 temperature 20.0 270 > th dose independent rect. 22 3
10 49.11 temperature 20.0 270 > th dose dependent rect. 22 3
11 49.16 temperature 15.0 270 > th dose dependent rect. 20 7
88 51.96 temperature 25.0 270 < th dose independent rect. 1 6
98 52.14 temperature 25.0 270 < th dose independent rect. 3 3
116 52.42 temperature 25.0 270 < th dose independent rect. 16 15
133 52.88 humidity 80.0 270 > th dose independent rect. 20 7
143 52.97 humidity 80.0 720 < th dose independent rect. 19 2
160 53.20 humidity 80.0 10 > th dose independent rect. 22 7
170 53.33 temperature 25.0 270 < th dose independent rect. 23 8
194 53.64 humidity 80.0 270 > th dose independent rect. 22 3
195 53.64 humidity 80.0 720 < th dose dependent rect. 19 6
196 53.66 precipitation 0.1 270 < th dose independent rect. 3 3
198 53.66 temperature 25.0 270 < th dose independent rect. 21 10
199 53.66 precipitation 0.1 270 < th dose dependent rect. 3 3
232 53.95 temperature 15.0 90 > th dose independent rect. 4 18
234 53.95 humidity 50.0 90 > th dose dependent rect. 4 5
239 53.98 atmosphere 1015.0 270 < th dose independent rect. 6 21
240 53.99 atmosphere 1015.0 10 < th dose independent rect. 22 7
244 54.01 wind 7.0 270 < th dose independent rect. 3 3
246 54.02 temperature 20.0 90 > th dose independent rect. 9 19
251 54.04 temperature 15.0 270 > th dose independent rect. 1 21
254 54.05 atmosphere 1015.0 270 < th dose independent rect. 7 19
258 54.06 wind 9.0 270 < th dose independent rect. 6 21
260 54.07 temperature 10.0 270 > th dose independent rect. 3 3
264 54.07 humidity 50.0 270 > th dose independent rect. 3 3
267 54.07 atmosphere 995.0 270 > th dose independent rect. 3 3
268 54.07 atmosphere 1015.0 270 < th dose independent rect. 3 3
269 54.07 radiation 20.0 270 < th dose independent rect. 3 3
273 54.07 radiation 30.0 90 < th dose independent rect. 4 5
274 54.07 precipitation 0.1 270 < th dose independent rect. 16 15
275 54.07 temperature 10.0 270 > th dose independent rect. 6 21
277 54.07 precipitation 0.1 270 < th dose dependent rect. 16 15
280 54.10 atmosphere 1015.0 90 < th dose independent rect. 9 19
286 54.15 radiation 40.0 270 < th dose dependent rect. 3 3
299 54.24 precipitation 0.1 270 < th dose independent rect. 1 21
301 54.24 precipitation 0.1 270 < th dose dependent rect. 1 21
309 54.32 atmosphere 995.0 270 > th dose independent rect. 6 21
310 54.32 humidity 50.0 270 > th dose dependent rect. 3 3
312 54.32 humidity 50.0 10 > th dose dependent rect. 22 7
314 54.33 atmosphere 1015.0 10 < th dose independent rect. 9 20
319 54.37 temperature 25.0 270 < th dose independent sin 10 NA
325 54.40 humidity 70.0 90 > th dose independent rect. 4 5
329 54.41 radiation 40.0 10 < th dose dependent rect. 5 6
343 54.48 temperature 15.0 270 > th dose independent rect. 2 19
359 54.53 wind 9.0 10 < th dose dependent rect. 5 4
361 54.53 radiation 40.0 10 < th dose dependent rect. 5 4
363 54.54 wind 7.0 270 < th dose independent rect. 2 5
367 54.55 temperature 20.0 270 > th dose independent rect. 9 17
368 54.55 precipitation 0.1 10 < th dose independent rect. 5 17
370 54.55 humidity 50.0 10 > th dose dependent rect. 5 4
372 54.55 precipitation 0.1 10 < th dose dependent rect. 5 17
373 54.56 radiation 30.0 10 < th dose independent rect. 5 4
383 54.57 humidity 60.0 90 > th dose dependent rect. 21 7
387 54.59 wind 9.0 270 < th dose independent rect. 7 19
393 54.61 precipitation 0.1 270 < th dose independent rect. 6 21
394 54.61 radiation 1.0 10 < th dose dependent rect. 22 7
395 54.61 precipitation 0.1 270 < th dose dependent rect. 6 21
398 54.62 wind 9.0 10 < th dose independent rect. 22 7
399 54.62 temperature 10.0 10 > th dose independent rect. 22 7
400 54.62 temperature 30.0 10 < th dose independent rect. 22 7
401 54.62 humidity 50.0 10 > th dose independent rect. 22 7
404 54.62 atmosphere 995.0 10 > th dose independent rect. 22 7
405 54.62 radiation 1.0 10 < th dose independent rect. 22 7
410 54.62 temperature 10.0 10 > th dose independent rect. 5 17
412 54.62 atmosphere 1015.0 10 < th dose independent rect. 5 17
449 54.64 temperature 10.0 90 > th dose independent rect. 9 19
450 54.64 humidity 50.0 10 > th dose dependent rect. 5 6
458 54.68 humidity 70.0 10 > th dose independent rect. 5 4
461 54.69 wind 9.0 90 < th dose dependent rect. 4 5
465 54.70 wind 9.0 10 < th dose independent rect. 5 17
469 54.71 wind 9.0 270 < th dose independent rect. 7 9
473 54.72 radiation 30.0 270 < th dose independent rect. 1 8
474 54.72 atmosphere 995.0 270 > th dose independent rect. 7 19
483 54.77 wind 5.0 270 < th dose independent rect. 22 3
486 54.78 radiation 30.0 10 < th dose independent rect. 5 6
489 54.79 atmosphere 1015.0 270 < th dose independent rect. 22 3
501 54.81 temperature 30.0 270 < th dose dependent rect. 3 3
503 54.81 temperature 30.0 270 < th dose dependent rect. 1 6
504 54.82 humidity 90.0 270 > th dose independent rect. 4 1
508 54.82 temperature 10.0 270 > th dose independent rect. 7 9
509 54.82 atmosphere 1015.0 270 < th dose independent rect. 7 9
510 54.82 temperature 10.0 270 > th dose independent rect. 16 15
511 54.82 radiation 40.0 270 < th dose independent rect. 16 15
512 54.82 wind 9.0 270 < th dose dependent rect. 3 3
521 54.84 precipitation 0.1 10 < th dose independent rect. 5 4
523 54.84 precipitation 0.1 270 < th dose independent rect. 2 19
525 54.84 precipitation 0.1 10 < th dose dependent rect. 5 4
526 54.84 precipitation 0.1 270 < th dose dependent rect. 2 19
532 54.87 wind 7.0 10 < th dose independent rect. 5 4
534 54.87 temperature 10.0 10 > th dose independent rect. 5 4
536 54.87 temperature 30.0 10 < th dose independent rect. 5 4
537 54.87 humidity 50.0 10 > th dose independent rect. 5 4
539 54.87 atmosphere 995.0 10 > th dose independent rect. 5 4
540 54.87 atmosphere 1015.0 10 < th dose independent rect. 5 4
543 54.87 temperature 10.0 10 > th dose independent rect. 9 20
548 54.88 humidity 50.0 270 > th dose dependent rect. 22 3
560 54.90 wind 9.0 270 < th dose dependent rect. 22 3
562 54.90 radiation 1.0 10 < th dose dependent rect. 22 19
575 54.92 precipitation 0.1 270 < th dose independent rect. 3 17
576 54.92 wind 9.0 90 < th dose independent rect. 9 19
581 54.92 precipitation 0.1 270 < th dose dependent rect. 3 17
596 54.97 precipitation 0.1 270 < th dose independent rect. 1 7
597 54.97 precipitation 0.1 270 < th dose dependent rect. 1 7
598 54.98 humidity 50.0 270 > th dose dependent rect. 19 8
602 54.99 atmosphere 995.0 270 > th dose dependent rect. 3 3
605 55.00 precipitation 0.1 270 < th dose independent rect. 7 19
608 55.00 precipitation 0.1 270 < th dose dependent rect. 7 19
616 55.02 radiation 1.0 10 < th dose dependent rect. 22 10
623 55.04 precipitation 0.1 270 < th dose independent rect. 7 9
625 55.04 precipitation 0.1 270 < th dose dependent rect. 7 9
641 55.06 humidity 70.0 270 > th dose independent rect. 1 7
648 55.07 wind 9.0 90 < th dose dependent rect. 21 7
655 55.09 wind 9.0 270 < th dose independent rect. 16 15
673 55.13 humidity 80.0 10 > th dose independent rect. 11 18
674 55.13 atmosphere 995.0 90 > th dose independent rect. 9 19
675 55.13 humidity 50.0 270 > th dose independent rect. 6 21
681 55.14 wind 7.0 270 < th dose independent rect. 1 7
686 55.15 atmosphere 995.0 10 > th dose independent rect. 5 17
716 55.20 atmosphere 995.0 270 > th dose independent rect. 7 9
720 55.21 wind 1.0 270 > th dose independent rect. 2 5
723 55.21 precipitation 0.1 90 < th dose independent rect. 9 19
727 55.21 precipitation 0.1 90 < th dose dependent rect. 9 19
735 55.23 humidity 90.0 270 > th dose independent rect. 3 3
736 55.23 atmosphere 1015.0 270 < th dose independent rect. 22 14
746 55.24 atmosphere 995.0 10 > th dose dependent rect. 5 4
762 55.27 wind 5.0 270 < th dose independent rect. 21 5
764 55.27 temperature 20.0 30 > th dose independent rect. 11 17
766 55.27 atmosphere 995.0 10 > th dose independent rect. 9 20
768 55.28 radiation 1.0 10 > th dose independent sin 10 NA
775 55.29 temperature 10.0 270 > th dose independent rect. 1 7
778 55.29 humidity 50.0 270 > th dose independent rect. 1 7
780 55.29 atmosphere 995.0 270 > th dose independent rect. 1 7
781 55.29 atmosphere 1015.0 270 < th dose independent rect. 1 7
824 55.33 wind 9.0 10 < th dose independent rect. 9 20
827 55.33 temperature 10.0 10 > th dose dependent rect. 9 20
838 55.35 radiation 1.0 10 < th dose independent rect. 22 10
842 55.35 precipitation 0.1 10 < th dose independent rect. 9 20
845 55.35 precipitation 0.1 10 < th dose dependent rect. 9 20
852 55.36 humidity 80.0 90 > th dose independent rect. 11 17
860 55.37 temperature 10.0 270 > th dose independent rect. 22 3
861 55.37 temperature 30.0 270 < th dose independent rect. 22 3
862 55.37 humidity 50.0 270 > th dose independent rect. 22 3
865 55.37 atmosphere 995.0 270 > th dose independent rect. 22 3
866 55.37 radiation 1.0 270 < th dose independent rect. 22 3
871 55.37 precipitation 0.1 270 < th dose independent rect. 22 3
876 55.37 radiation 1.0 270 < th dose dependent rect. 22 3
881 55.37 precipitation 0.1 270 < th dose dependent rect. 22 3
888 55.37 humidity 70.0 30 > th dose dependent rect. 10 18
890 55.38 humidity 80.0 10 > th dose independent rect. 18 11
896 55.39 atmosphere 995.0 270 > th dose independent rect. 8 17
923 55.41 radiation 1.0 10 < th dose dependent sin 9 NA
945 55.43 radiation 40.0 270 < th dose dependent rect. 1 8
985 55.45 temperature 10.0 90 > th dose dependent rect. 9 19