Os04g0489400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0489400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.27 | 0.267 | 11.4 | -0.128 | 0.213 | 0.305 | -0.0427 | 0.995 | 0.121 | 17.4 | 64 | 4502 | -- | -- |
| 33.19 | 0.268 | 11.5 | -0.104 | 0.222 | 0.312 | -0.114 | -- | 0.0853 | 17.4 | 64.01 | 3330 | -- | -- |
| 32.24 | 0.264 | 11.4 | -0.133 | 0.227 | 0.298 | -- | 0.973 | 0.127 | 17.5 | 64.12 | 4657 | -- | -- |
| 33.08 | 0.268 | 11.5 | -0.144 | 0.246 | 0.32 | -- | -- | 0.0889 | 17.6 | 65 | 3341 | -- | -- |
| 34.42 | 0.273 | 11.5 | -0.125 | -- | 0.333 | -- | 0.794 | 0.0918 | -- | 64.07 | 4155 | -- | -- |
| 35.69 | 0.28 | 11.4 | -0.152 | 0.214 | -- | -0.0395 | -- | 0.165 | 17.4 | -- | -- | -- | -- |
| 35.7 | 0.28 | 11.4 | -0.152 | 0.214 | -- | -- | -- | 0.165 | 17.4 | -- | -- | -- | -- |
| 35.12 | 0.276 | 11.5 | -0.167 | -- | 0.401 | -- | -- | 0.054 | -- | 64.7 | 4080 | -- | -- |
| 33.62 | 0.27 | 11.5 | -- | 0.242 | 0.33 | -- | -- | 0.106 | 17.7 | 65.59 | 3330 | -- | -- |
| 38.08 | 0.288 | 11.4 | -0.159 | -- | -- | -- | -- | 0.16 | -- | -- | -- | -- | -- |
| 36.3 | 0.282 | 11.4 | -- | 0.217 | -- | -- | -- | 0.182 | 17.4 | -- | -- | -- | -- |
| 34.95 | 0.275 | 11.4 | -- | -- | 0.319 | -- | -- | 0.214 | -- | 74 | 1260 | -- | -- |
| 38.75 | 0.291 | 11.4 | -- | -- | -- | -- | -- | 0.177 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.09 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 4 | 30.41 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 8 | 30.47 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 20 | 30.58 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 19 |
| 29 | 30.67 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 41 | 30.76 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 42 | 30.76 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 7 |
| 63 | 30.84 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 86 | 30.90 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 93 | 30.93 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 125 | 31.00 | wind | 3.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 130 | 31.01 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 142 | 31.02 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 168 | 31.06 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 212 | 31.10 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 215 | 31.10 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 5 |
| 233 | 31.12 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 247 | 31.13 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 312 | 31.18 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 323 | 31.18 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 367 | 31.22 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 16 |
| 442 | 31.27 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 448 | 31.28 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 568 | 31.37 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 577 | 31.38 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 578 | 31.38 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 614 | 31.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 622 | 31.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 674 | 31.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 680 | 31.44 | wind | 1.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 681 | 31.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 793 | 31.52 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 16 |
| 818 | 31.54 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 855 | 31.56 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 928 | 31.62 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |