Os04g0483300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0483300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.41 | 0.368 | 3.07 | 0.25 | 0.359 | 0.305 | -1.09 | -1.17 | 0.0656 | 12.6 | 0.1307 | 145 | -- | -- |
| 62.87 | 0.369 | 3.07 | 0.141 | 0.229 | 0.221 | 0.213 | -- | 0.0519 | 13.5 | 22.05 | 249 | -- | -- |
| 61.87 | 0.366 | 3.07 | 0.204 | 0.416 | 0.352 | -- | -0.274 | 0.0531 | 12.8 | 0.04999 | 151 | -- | -- |
| 62.31 | 0.368 | 3.07 | 0.199 | 0.415 | 0.349 | -- | -- | 0.052 | 13 | 0.005937 | 153 | -- | -- |
| 63.25 | 0.37 | 3.09 | 0.153 | -- | 0.0206 | -- | -0.263 | 0.0297 | -- | 16.28 | 184 | -- | -- |
| 63.46 | 0.373 | 3.09 | 0.149 | 0.0178 | -- | 0.174 | -- | 0.0298 | 11.4 | -- | -- | -- | -- |
| 63.59 | 0.373 | 3.09 | 0.155 | 0.0193 | -- | -- | -- | 0.0303 | 9.62 | -- | -- | -- | -- |
| 63.48 | 0.371 | 3.09 | 0.156 | -- | 0.0592 | -- | -- | 0.0335 | -- | 65.85 | 258 | -- | -- |
| 63.31 | 0.371 | 3.07 | -- | 0.415 | 0.349 | -- | -- | 0.052 | 13 | 0.005944 | 153 | -- | -- |
| 63.61 | 0.373 | 3.09 | 0.155 | -- | -- | -- | -- | 0.0303 | -- | -- | -- | -- | -- |
| 64.22 | 0.375 | 3.09 | -- | 0.0193 | -- | -- | -- | 0.013 | 9.01 | -- | -- | -- | -- |
| 64.12 | 0.373 | 3.09 | -- | -- | 0.0582 | -- | -- | 0.0163 | -- | 72.52 | 258 | -- | -- |
| 64.25 | 0.374 | 3.09 | -- | -- | -- | -- | -- | 0.0131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.72 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 4 | 49.72 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 8 | 49.72 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 14 | 49.72 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 15 | 49.72 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 35 | 49.72 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 38 | 49.77 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 40 | 49.80 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 42 | 49.80 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 43 | 49.81 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 45 | 49.84 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 47 | 49.87 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 48 | 49.87 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 49 | 49.88 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 51 | 49.88 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 54 | 49.90 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 60 | 49.93 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 66 | 49.95 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 68 | 49.95 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 69 | 49.95 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 73 | 49.95 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 75 | 49.95 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 80 | 49.95 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 81 | 49.95 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 82 | 49.95 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 83 | 49.95 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 88 | 49.95 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 94 | 50.00 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 101 | 50.16 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 103 | 50.20 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 104 | 50.21 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 106 | 50.26 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 116 | 50.52 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 166 | 52.47 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 171 | 52.90 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 21 | 23 |
| 172 | 52.90 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 196 | 54.97 | humidity | 50.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 212 | 55.92 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 214 | 55.92 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 247 | 56.62 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 289 | 57.81 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 299 | 57.98 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 307 | 58.11 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 387 | 59.01 | temperature | 30.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 537 | 59.78 | wind | 1.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 565 | 60.01 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 572 | 60.03 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 604 | 60.09 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 625 | 60.20 | radiation | 10.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 778 | 60.49 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 9 |
| 810 | 60.57 | wind | 9.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 856 | 60.64 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 885 | 60.65 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 21 | 12 |
| 889 | 60.67 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 21 | 12 |
| 942 | 60.72 | wind | 3.0 | 270 | > th | dose independent | rect. | 17 | 4 |
| 975 | 60.75 | radiation | 40.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 984 | 60.76 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 14 |
| 987 | 60.76 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 14 |