Os04g0482900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0482900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.94 | 0.54 | 13.8 | -0.96 | 1.96 | -2 | 1.87 | 1.85 | -0.682 | 11.9 | 2.841 | 62 | 23.7 | -- |
| 137.49 | 0.546 | 13.8 | -0.955 | 2.11 | -1.9 | 1.11 | -- | -0.664 | 11.9 | 2.65 | 60 | 23.3 | -- |
| 142.52 | 0.556 | 13.8 | -0.917 | 1.63 | -2.13 | -- | 0.317 | -0.71 | 11.6 | 3.896 | 58 | 0.864 | -- |
| 141.45 | 0.554 | 13.8 | -0.923 | 2.06 | -1.91 | -- | -- | -0.663 | 12 | 2.786 | 57 | 23.4 | -- |
| 149.64 | 0.57 | 13.8 | -0.881 | -- | -2.98 | -- | -0.35 | -0.727 | -- | 12.04 | 31 | 3.83 | -- |
| 201.27 | 0.665 | 13.8 | -0.967 | 3.21 | -- | 0.895 | -- | -0.565 | 13.3 | -- | -- | -- | -- |
| 204.53 | 0.67 | 13.8 | -0.935 | 3.21 | -- | -- | -- | -0.56 | 13.3 | -- | -- | -- | -- |
| 150.28 | 0.571 | 13.8 | -0.91 | -- | -3.05 | -- | -- | -0.717 | -- | 11.51 | 31 | 3.83 | -- |
| 163.59 | 0.596 | 13.8 | -- | 1.98 | -1.99 | -- | -- | -0.591 | 11.9 | 3.31 | 57 | 23.7 | -- |
| 840.76 | 1.35 | 13.8 | -1.06 | -- | -- | -- | -- | -0.626 | -- | -- | -- | -- | -- |
| 227.59 | 0.706 | 13.7 | -- | 3.23 | -- | -- | -- | -0.456 | 13.3 | -- | -- | -- | -- |
| 171.93 | 0.611 | 13.8 | -- | -- | -3.06 | -- | -- | -0.619 | -- | 10.99 | 30 | 3.75 | -- |
| 870.44 | 1.38 | 13.8 | -- | -- | -- | -- | -- | -0.509 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.25 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 2 | 133.93 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 3 | 134.30 | radiation | 1.0 | 90 | < th | dose independent | sin | 7 | NA |
| 5 | 134.76 | radiation | 1.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 10 | 135.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 23 |
| 11 | 135.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 12 | 135.31 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 19 | 136.81 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 15 |
| 20 | 136.86 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 15 |
| 21 | 136.94 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 30 | 137.95 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 12 |
| 31 | 138.08 | humidity | 80.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 32 | 138.10 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 12 |
| 49 | 138.64 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 20 |
| 50 | 138.64 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 54 | 138.82 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 57 | 138.91 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 59 | 139.09 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 82 | 140.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 21 |
| 83 | 140.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 90 | 141.07 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 91 | 141.09 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 5 |
| 97 | 141.21 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 118 | 141.47 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 120 | 141.47 | temperature | 30.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 121 | 141.47 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 125 | 141.47 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 130 | 141.47 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 20 |
| 132 | 141.49 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 144 | 141.68 | radiation | 1.0 | 90 | > th | dose independent | sin | 7 | NA |
| 164 | 142.49 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 20 |
| 167 | 142.55 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 177 | 142.89 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 4 |
| 178 | 142.89 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 216 | 144.04 | humidity | 80.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 233 | 144.53 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 253 | 145.16 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 20 |
| 258 | 145.21 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 331 | 146.30 | wind | 9.0 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 364 | 146.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 405 | 147.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 11 |
| 407 | 147.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 11 |
| 441 | 147.77 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 442 | 147.81 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 1 |
| 443 | 147.81 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 446 | 147.83 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 448 | 147.83 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 449 | 147.83 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 453 | 147.83 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 455 | 147.83 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 460 | 147.83 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 23 |
| 461 | 147.83 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 475 | 147.96 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 478 | 148.09 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 20 |
| 481 | 148.12 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 20 |
| 511 | 148.67 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 21 |
| 753 | 151.16 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 20 |
| 798 | 151.75 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 14 |
| 799 | 151.75 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 14 |
| 807 | 151.87 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 809 | 151.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 11 |
| 810 | 151.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 13 |
| 811 | 151.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 13 |
| 812 | 151.89 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 13 |
| 821 | 151.96 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 845 | 152.07 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 894 | 152.36 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 13 |
| 987 | 153.31 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 14 |
| 988 | 153.31 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 14 |
| 994 | 153.40 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 11 |