Os04g0482300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BTB domain containing protein.
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Os04g0482300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BTB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 669.9 | 1.22 | 9.87 | -2.43 | 4.59 | -4.67 | -0.794 | 1.16 | -0.461 | 14.6 | 0.22 | 55 | -- | -- |
| 674.28 | 1.21 | 9.87 | -2.29 | 4.54 | -4.69 | -1.52 | -- | -0.392 | 14.6 | 0.2276 | 55 | -- | -- |
| 668.97 | 1.2 | 9.88 | -2.47 | 4.62 | -4.66 | -- | 1.64 | -0.489 | 14.6 | 0.1704 | 55 | -- | -- |
| 685.23 | 1.22 | 9.87 | -2.45 | 4.58 | -4.67 | -- | -- | -0.478 | 14.6 | 0.17 | 55 | -- | -- |
| 990.25 | 1.47 | 10.1 | -2.78 | -- | -7.3 | -- | 3.01 | -0.964 | -- | 0.42 | 150 | -- | -- |
| 1087.12 | 1.55 | 9.73 | -2 | 9.53 | -- | -1.72 | -- | -0.283 | 13.2 | -- | -- | -- | -- |
| 1099.36 | 1.55 | 9.73 | -2.06 | 9.53 | -- | -- | -- | -0.293 | 13.2 | -- | -- | -- | -- |
| 942.81 | 1.43 | 9.95 | -2.69 | -- | -7.74 | -- | -- | -0.814 | -- | 0.2402 | 133 | -- | -- |
| 836.51 | 1.35 | 9.8 | -- | 4.84 | -4.43 | -- | -- | -0.195 | 14.4 | 0.3037 | 55 | -- | -- |
| 6721.33 | 3.83 | 9.88 | -2.42 | -- | -- | -- | -- | -0.486 | -- | -- | -- | -- | -- |
| 1210.83 | 1.63 | 9.68 | -- | 9.57 | -- | -- | -- | -0.0635 | 13.2 | -- | -- | -- | -- |
| 1125.48 | 1.56 | 9.89 | -- | -- | -7.68 | -- | -- | -0.532 | -- | 0.3012 | 132 | -- | -- |
| 6876.44 | 3.87 | 9.82 | -- | -- | -- | -- | -- | -0.217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 689.98 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 15 | 14 |
| 3 | 691.53 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 6 | 23 |
| 4 | 691.60 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 11 | 18 |
| 21 | 701.95 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 15 | 21 |
| 49 | 703.60 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 53 | 704.12 | radiation | 1.0 | 30 | < th | dose dependent | no | NA | NA |
| 71 | 704.62 | radiation | 1.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 83 | 710.37 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 12 |
| 114 | 714.95 | radiation | 1.0 | 30 | < th | dose independent | rect. | 11 | 18 |
| 262 | 744.07 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 274 | 749.52 | temperature | 30.0 | 30 | < th | dose independent | rect. | 18 | 11 |
| 283 | 752.96 | radiation | 1.0 | 30 | < th | dose dependent | sin | 12 | NA |
| 293 | 757.74 | radiation | 1.0 | 30 | < th | dose independent | rect. | 15 | 21 |
| 310 | 758.57 | radiation | 1.0 | 30 | < th | dose independent | rect. | 17 | 23 |
| 315 | 759.04 | radiation | 1.0 | 30 | < th | dose independent | sin | 12 | NA |
| 316 | 759.15 | radiation | 1.0 | 30 | < th | dose independent | no | NA | NA |
| 325 | 759.49 | radiation | 1.0 | 30 | > th | dose independent | no | NA | NA |
| 326 | 759.49 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 14 |
| 382 | 759.57 | humidity | 60.0 | 30 | > th | dose independent | rect. | 18 | 11 |
| 399 | 762.20 | radiation | 1.0 | 30 | > th | dose independent | sin | 12 | NA |
| 420 | 766.11 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 14 |
| 428 | 766.89 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 13 |
| 429 | 766.89 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 13 |
| 492 | 774.42 | wind | 7.0 | 90 | < th | dose independent | rect. | 18 | 11 |
| 501 | 775.46 | temperature | 15.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 640 | 782.11 | radiation | 20.0 | 90 | < th | dose independent | rect. | 18 | 11 |
| 643 | 782.11 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 13 |
| 644 | 782.11 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 13 |
| 646 | 782.38 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 18 | 11 |
| 656 | 783.60 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 13 |
| 703 | 786.62 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 23 |
| 838 | 791.70 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 845 | 792.63 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 861 | 793.47 | wind | 1.0 | 90 | > th | dose independent | rect. | 18 | 11 |
| 868 | 794.18 | radiation | 1.0 | 30 | > th | dose independent | rect. | 15 | 18 |
| 869 | 794.33 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 907 | 798.77 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 19 | 10 |
| 909 | 798.77 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 19 | 10 |
| 916 | 799.74 | radiation | 1.0 | 30 | > th | dose independent | rect. | 17 | 15 |
| 918 | 800.30 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 19 | 10 |
| 932 | 801.98 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 18 | 11 |