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Os04g0479300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0118) R2 : 0.000766
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0147 (0.0249) R2dN8 : 0.000989 R2N8 : 0.000766
σ : 0.223
deviance : 22.78
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
16.32 0.19 11.1 0.61 0.267 -0.495 -0.198 1.92 0.174 22.4 24.8 1115 -- --
17 0.192 11.1 0.298 0.205 -0.345 -0.0867 -- 0.219 22.3 23 15562 -- --
16.46 0.189 11.1 0.597 0.264 -0.485 -- 1.78 0.17 22.6 24.8 1140 -- --
16.76 0.191 11.1 0.416 0.207 -0.43 -- -- 0.19 22.5 20 22650 -- --
19.48 0.206 11.1 0.58 -- -0.399 -- 1.43 0.177 -- 24.35 1400 -- --
20.38 0.212 11.2 0.0705 0.19 -- -0.128 -- 0.0231 21.9 -- -- -- --
20.44 0.212 11.2 0.0753 0.191 -- -- -- 0.0233 22 -- -- -- --
19.2 0.204 11.1 0.43 -- -0.416 -- -- 0.195 -- 19.7 23156 -- --
18.49 0.2 11.2 -- 0.189 -0.275 -- -- 0.13 23.1 22.69 9871 -- --
22.63 0.222 11.2 0.0775 -- -- -- -- 0.0233 -- -- -- -- --
20.59 0.212 11.2 -- 0.191 -- -- -- 0.0149 22 -- -- -- --
20.34 0.21 11.2 -- -- -0.238 -- -- 0.0944 -- 25.95 8819 -- --
22.78 0.223 11.2 -- -- -- -- -- 0.0147 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.90 temperature 25.0 720 > th dose dependent rect. 17 11
6 15.92 humidity 80.0 43200 < th dose dependent rect. 3 5
7 15.92 temperature 25.0 720 > th dose dependent rect. 17 7
11 15.94 temperature 25.0 1440 > th dose dependent rect. 20 3
12 15.95 temperature 25.0 1440 > th dose independent rect. 20 4
14 15.97 temperature 25.0 1440 > th dose dependent rect. 21 1
17 15.99 temperature 25.0 1440 > th dose independent rect. 21 2
19 16.01 temperature 25.0 1440 > th dose dependent rect. 19 6
20 16.02 temperature 25.0 1440 < th dose independent rect. 20 4
28 16.06 temperature 25.0 1440 < th dose independent rect. 21 2
32 16.08 temperature 25.0 720 > th dose dependent sin 11 NA
43 16.12 humidity 80.0 43200 < th dose dependent rect. 5 2
86 16.27 radiation 1.0 14400 < th dose dependent rect. 21 8
88 16.29 radiation 10.0 43200 < th dose independent rect. 5 2
101 16.29 radiation 1.0 14400 < th dose dependent rect. 19 10
126 16.40 wind 1.0 43200 < th dose dependent rect. 23 6
146 16.45 wind 1.0 43200 < th dose dependent rect. 19 11
168 16.52 temperature 25.0 14400 < th dose independent rect. 10 1
172 16.53 wind 9.0 14400 > th dose dependent rect. 10 1
173 16.53 radiation 1.0 43200 > th dose dependent rect. 4 2
184 16.53 precipitation 0.1 14400 > th dose dependent rect. 1 10
186 16.53 precipitation 0.1 14400 > th dose dependent rect. 2 12
187 16.54 temperature 25.0 14400 > th dose independent rect. 10 1
191 16.55 wind 3.0 43200 < th dose independent rect. 8 1
196 16.56 precipitation 0.1 14400 > th dose dependent sin 4 NA
201 16.57 temperature 25.0 43200 > th dose independent rect. 23 1
202 16.57 precipitation 0.1 14400 < th dose independent rect. 3 8
203 16.57 precipitation 0.1 14400 < th dose dependent rect. 3 8
204 16.58 temperature 20.0 14400 < th dose independent rect. 24 1
210 16.59 precipitation 0.1 14400 > th dose independent rect. 3 8
213 16.59 temperature 25.0 14400 > th dose independent rect. 1 11
222 16.60 humidity 80.0 43200 > th dose independent rect. 2 1
225 16.60 temperature 25.0 14400 > th dose independent rect. 2 9
247 16.62 temperature 25.0 14400 > th dose independent rect. 8 1
248 16.62 radiation 10.0 43200 < th dose independent rect. 17 1
249 16.62 temperature 25.0 14400 > th dose independent rect. 7 4
250 16.62 temperature 25.0 14400 < th dose independent rect. 7 4
252 16.62 temperature 25.0 14400 < th dose independent rect. 3 8
270 16.63 precipitation 0.1 14400 > th dose independent rect. 2 16
271 16.63 precipitation 0.1 14400 < th dose independent rect. 2 16
273 16.63 radiation 1.0 14400 < th dose dependent rect. 4 1
280 16.63 precipitation 0.1 14400 < th dose dependent rect. 2 16
281 16.64 temperature 25.0 14400 < th dose independent rect. 7 1
294 16.64 temperature 25.0 14400 > th dose dependent rect. 13 1
300 16.64 precipitation 0.1 14400 > th dose dependent rect. 2 15
323 16.65 wind 1.0 43200 < th dose dependent rect. 17 13
331 16.66 temperature 20.0 14400 < th dose independent rect. 18 8
353 16.67 radiation 10.0 43200 < th dose independent rect. 17 5
362 16.67 precipitation 0.1 14400 < th dose independent rect. 2 12
364 16.67 precipitation 0.1 14400 > th dose independent rect. 23 19
365 16.67 precipitation 0.1 14400 < th dose independent rect. 23 19
367 16.67 temperature 25.0 14400 > th dose dependent rect. 11 1
368 16.67 temperature 25.0 14400 > th dose dependent rect. 11 3
374 16.67 precipitation 0.1 14400 < th dose dependent rect. 2 12
375 16.67 precipitation 0.1 14400 > th dose dependent rect. 23 15
376 16.67 precipitation 0.1 14400 < th dose dependent rect. 23 19
404 16.68 precipitation 0.1 14400 > th dose independent rect. 2 12
418 16.69 humidity 80.0 43200 < th dose independent rect. 5 2
419 16.69 wind 3.0 43200 < th dose independent rect. 6 3
475 16.71 temperature 25.0 14400 > th dose independent sin 5 NA
518 16.72 wind 3.0 43200 > th dose independent rect. 6 3
560 16.72 precipitation 0.1 14400 > th dose dependent rect. 23 18
563 16.73 wind 3.0 43200 > th dose independent rect. 8 1
566 16.73 wind 7.0 43200 > th dose independent rect. 11 3
568 16.73 wind 7.0 43200 < th dose independent rect. 11 3
574 16.73 wind 9.0 43200 < th dose independent rect. 10 5
577 16.73 humidity 80.0 43200 < th dose independent rect. 2 5
615 16.74 temperature 30.0 43200 > th dose independent rect. 13 2
639 16.74 temperature 25.0 14400 > th dose independent rect. 17 19
652 16.75 precipitation 0.1 14400 > th dose independent sin 4 NA
653 16.75 precipitation 0.1 14400 < th dose independent sin 4 NA
654 16.75 humidity 80.0 43200 < th dose independent rect. 2 1
655 16.75 temperature 30.0 43200 < th dose independent rect. 13 2
664 16.75 humidity 80.0 43200 > th dose independent rect. 2 5
684 16.75 precipitation 0.1 14400 < th dose dependent sin 4 NA
685 16.75 temperature 25.0 43200 > th dose dependent rect. 18 1
727 16.76 wind 3.0 43200 < th dose independent rect. 3 7
764 16.76 temperature 25.0 1440 > th dose dependent rect. 11 16
766 16.76 temperature 25.0 14400 > th dose dependent rect. 24 16
771 16.77 temperature 25.0 14400 < th dose independent sin 5 NA
801 16.77 humidity 90.0 43200 > th dose independent rect. 14 15
811 16.77 wind 3.0 43200 < th dose dependent rect. 8 1
816 16.77 temperature 25.0 43200 > th dose dependent rect. 17 6
828 16.77 temperature 25.0 14400 > th dose dependent rect. 2 13
834 16.77 temperature 25.0 1440 > th dose dependent rect. 11 14
884 16.78 humidity 90.0 43200 > th dose independent rect. 17 12
894 16.78 temperature 25.0 14400 > th dose dependent sin 22 NA
900 16.78 temperature 25.0 43200 > th dose dependent rect. 18 4
918 16.78 temperature 25.0 14400 > th dose dependent rect. 3 11
936 16.78 temperature 25.0 14400 > th dose dependent rect. 11 14
995 16.79 wind 3.0 43200 > th dose independent rect. 3 7