Os04g0477900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cysteine proteinase EP-B 1 precursor (EC 3.4.22.-).
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Os04g0477900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cysteine proteinase EP-B 1 precursor (EC 3.4.22.-).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.95 | 0.304 | 11.4 | -0.288 | 0.472 | 1.75 | 0.0863 | -1.36 | -0.461 | 18.7 | 20.43 | 96 | -- | -- |
| 43.54 | 0.307 | 11.3 | -0.0636 | 0.485 | 1.68 | -0.0878 | -- | -0.393 | 18.7 | 19.98 | 97 | -- | -- |
| 41.97 | 0.302 | 11.4 | -0.287 | 0.471 | 1.75 | -- | -1.34 | -0.461 | 18.7 | 20.46 | 95 | -- | -- |
| 43.54 | 0.307 | 11.3 | -0.0524 | 0.485 | 1.67 | -- | -- | -0.391 | 18.6 | 20.07 | 95 | -- | -- |
| 49.01 | 0.326 | 11.4 | -0.381 | -- | 1.98 | -- | -1.27 | -0.505 | -- | 19.49 | 206 | -- | -- |
| 86.77 | 0.437 | 11.3 | 0.319 | 1 | -- | 0.515 | -- | -0.107 | 16.7 | -- | -- | -- | -- |
| 87.46 | 0.438 | 11.3 | 0.321 | 1.01 | -- | -- | -- | -0.104 | 16.7 | -- | -- | -- | -- |
| 50.21 | 0.33 | 11.3 | -0.213 | -- | 2.4 | -- | -- | -0.461 | -- | 15.23 | 220 | -- | -- |
| 43.6 | 0.308 | 11.3 | -- | 0.488 | 1.65 | -- | -- | -0.383 | 18.6 | 20.13 | 95 | -- | -- |
| 141.35 | 0.556 | 11.3 | 0.283 | -- | -- | -- | -- | -0.131 | -- | -- | -- | -- | -- |
| 90.19 | 0.444 | 11.3 | -- | 1 | -- | -- | -- | -0.14 | 16.7 | -- | -- | -- | -- |
| 51.32 | 0.334 | 11.3 | -- | -- | 2.31 | -- | -- | -0.43 | -- | 15.44 | 220 | -- | -- |
| 143.47 | 0.559 | 11.3 | -- | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.78 | temperature | 10 | 720 | > th | dose dependent | sin | 5 | NA |
| 3 | 35.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 14 | 36.64 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 23 | 37.03 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 36 | 37.48 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 15 |
| 42 | 37.70 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 13 |
| 60 | 38.10 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 98 | 38.72 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 100 | 38.78 | temperature | 30 | 270 | < th | dose dependent | sin | 2 | NA |
| 194 | 40.02 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 252 | 40.82 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 261 | 40.93 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 299 | 41.25 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 401 | 42.09 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 650 | 43.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 677 | 43.98 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 702 | 44.14 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 17 |
| 727 | 44.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 787 | 44.64 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 820 | 44.77 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 982 | 45.65 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |