Os04g0475900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0475900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.65 | 0.499 | 3.24 | 0.182 | 0.165 | 0.557 | 0.032 | 2.73 | 0.017 | 1.53 | 6.57 | 4304 | -- | -- |
| 114.4 | 0.498 | 3.19 | 0.104 | 0.122 | 0.188 | 0.0515 | -- | -0.0495 | 2.05 | 10.8 | 7411 | -- | -- |
| 112.65 | 0.494 | 3.24 | 0.18 | 0.165 | 0.556 | -- | 2.73 | 0.0167 | 1.63 | 6.575 | 4303 | -- | -- |
| 113.95 | 0.497 | 3.2 | 0.0579 | 0.16 | 0.213 | -- | -- | -0.115 | 2.71 | 10.95 | 7365 | -- | -- |
| 114.23 | 0.498 | 3.23 | 0.175 | -- | 0.529 | -- | 2.6 | 0.0311 | -- | 6.463 | 4257 | -- | -- |
| 116.4 | 0.506 | 3.17 | 0.0616 | 0.138 | -- | -0.0854 | -- | 0.0663 | 2.65 | -- | -- | -- | -- |
| 116.42 | 0.505 | 3.17 | 0.0639 | 0.137 | -- | -- | -- | 0.067 | 2.29 | -- | -- | -- | -- |
| 114.82 | 0.499 | 3.22 | 0.135 | -- | 0.283 | -- | -- | -0.166 | -- | 10.64 | 7408 | -- | -- |
| 113.91 | 0.497 | 3.22 | -- | 0.138 | 0.243 | -- | -- | -0.131 | 1.25 | 10.9 | 7411 | -- | -- |
| 117.54 | 0.507 | 3.17 | 0.0697 | -- | -- | -- | -- | 0.0703 | -- | -- | -- | -- | -- |
| 116.53 | 0.505 | 3.17 | -- | 0.139 | -- | -- | -- | 0.0599 | 2.3 | -- | -- | -- | -- |
| 114.08 | 0.497 | 3.29 | -- | -- | 0.565 | -- | -- | -0.447 | -- | 10.73 | 7391 | -- | -- |
| 117.67 | 0.506 | 3.17 | -- | -- | -- | -- | -- | 0.0626 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.87 | radiation | 30.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 17 | 102.73 | radiation | 30.0 | 30 | > th | dose dependent | rect. | 15 | 17 |
| 18 | 102.97 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 99 | 104.70 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 125 | 104.70 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 155 | 105.07 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 166 | 105.23 | wind | 7.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 171 | 105.59 | wind | 7.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 175 | 106.60 | wind | 7.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 201 | 107.62 | temperature | 30.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 204 | 107.85 | wind | 3.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 229 | 108.31 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 269 | 108.94 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 290 | 109.32 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 11 | 5 |
| 294 | 109.39 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 297 | 109.45 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 300 | 109.52 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 377 | 110.18 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 382 | 110.27 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 12 | 2 |
| 384 | 110.29 | wind | 7.0 | 4320 | > th | dose independent | rect. | 12 | 2 |
| 388 | 110.32 | temperature | 25.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 389 | 110.34 | wind | 7.0 | 4320 | < th | dose independent | rect. | 12 | 2 |
| 398 | 110.47 | wind | 7.0 | 4320 | > th | dose independent | rect. | 10 | 6 |
| 405 | 110.51 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 6 |
| 406 | 110.53 | wind | 7.0 | 4320 | < th | dose independent | rect. | 10 | 6 |
| 448 | 110.84 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 11 | 4 |
| 450 | 110.84 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 10 | 7 |
| 480 | 110.91 | wind | 9.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 482 | 110.91 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 486 | 110.91 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 490 | 110.91 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 495 | 110.91 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 496 | 110.91 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 498 | 110.91 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 502 | 110.92 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 512 | 110.94 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 515 | 110.96 | humidity | 80.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 521 | 110.98 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 529 | 111.00 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 532 | 111.00 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 535 | 111.00 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 536 | 111.00 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 537 | 111.00 | radiation | 20.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 540 | 111.00 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 1 |
| 542 | 111.00 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 543 | 111.00 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 549 | 111.01 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 7 | 23 |
| 550 | 111.02 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 558 | 111.04 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 745 | 111.41 | wind | 7.0 | 4320 | > th | dose independent | sin | 1 | NA |
| 781 | 111.44 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 789 | 111.46 | wind | 7.0 | 4320 | < th | dose independent | sin | 1 | NA |
| 808 | 111.48 | wind | 7.0 | 4320 | > th | dose independent | rect. | 24 | 16 |
| 841 | 111.51 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 847 | 111.52 | wind | 7.0 | 4320 | < th | dose independent | rect. | 24 | 16 |
| 849 | 111.52 | wind | 7.0 | 4320 | > th | dose dependent | sin | 1 | NA |
| 860 | 111.54 | atmosphere | 1010.0 | 10 | < th | dose independent | sin | 7 | NA |
| 898 | 111.57 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 965 | 111.69 | wind | 3.0 | 270 | > th | dose independent | rect. | 3 | 1 |