Os04g0469800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11).
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Os04g0469800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145.13 | 0.566 | 7.49 | -5 | 0.7 | 3.41 | -3.45 | 9.62 | -0.502 | 2.67 | 1.042 | 4375 | -- | -- |
| 210.63 | 0.676 | 7.27 | -3.32 | 0.274 | 2.42 | -2.97 | -- | -0.0628 | 3.74 | 3.43 | 5993 | -- | -- |
| 174.47 | 0.615 | 7.53 | -5.14 | 0.959 | 3.16 | -- | 9.57 | -0.608 | 1.58 | 1.244 | 5751 | -- | -- |
| 217.48 | 0.687 | 7.28 | -3.5 | 0.855 | 1.92 | -- | -- | -0.189 | 1.5 | 3.347 | 2894 | -- | -- |
| 214.41 | 0.682 | 7.49 | -4.9 | -- | 3.42 | -- | 9.68 | -0.589 | -- | 0.802 | 4390 | -- | -- |
| 271.29 | 0.772 | 7.37 | -3.84 | 0.886 | -- | -2.66 | -- | -0.58 | 2.05 | -- | -- | -- | -- |
| 292.01 | 0.8 | 7.37 | -3.76 | 0.919 | -- | -- | -- | -0.56 | 0.63 | -- | -- | -- | -- |
| 222.53 | 0.695 | 7.23 | -3.39 | -- | 3.04 | -- | -- | -0.0509 | -- | 3.114 | 3081 | -- | -- |
| 182.85 | 0.63 | 7.11 | -- | 0.915 | 3.44 | -- | -- | 0.825 | 0.257 | 7.282e-05 | 47520 | -- | -- |
| 344.88 | 0.868 | 7.35 | -3.72 | -- | -- | -- | -- | -0.544 | -- | -- | -- | -- | -- |
| 663.68 | 1.21 | 7.27 | -- | 0.863 | -- | -- | -- | -0.142 | 0.421 | -- | -- | -- | -- |
| 241.45 | 0.724 | 7.05 | -- | -- | 3.38 | -- | -- | 0.8 | -- | 0.008848 | 47520 | -- | -- |
| 710.45 | 1.24 | 7.26 | -- | -- | -- | -- | -- | -0.131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 140.34 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 2 | 140.85 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 13 |
| 24 | 142.06 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 23 |
| 37 | 142.68 | radiation | 1 | 43200 | < th | dose dependent | sin | 0 | NA |
| 41 | 142.85 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 45 | 142.95 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 7 |
| 53 | 143.40 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 69 | 143.58 | temperature | 20 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 73 | 143.65 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 11 |
| 74 | 143.66 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 13 |
| 77 | 143.73 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 86 | 143.79 | temperature | 20 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 87 | 143.80 | temperature | 20 | 43200 | < th | dose dependent | rect. | 2 | 10 |
| 102 | 143.86 | temperature | 20 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 105 | 143.86 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 17 |
| 150 | 143.92 | radiation | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 155 | 143.92 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 21 |
| 161 | 143.92 | radiation | 1 | 43200 | < th | dose dependent | rect. | 12 | 23 |
| 185 | 144.00 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 192 | 144.02 | temperature | 20 | 43200 | < th | dose dependent | sin | 5 | NA |
| 250 | 144.18 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 277 | 144.27 | radiation | 1 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 290 | 144.29 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 379 | 144.63 | radiation | 1 | 43200 | < th | dose dependent | rect. | 12 | 7 |
| 462 | 144.92 | temperature | 20 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 511 | 145.02 | temperature | 20 | 43200 | < th | dose dependent | rect. | 10 | 21 |
| 538 | 145.08 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 596 | 145.18 | temperature | 20 | 43200 | < th | dose dependent | no | NA | NA |
| 621 | 145.27 | temperature | 20 | 43200 | < th | dose dependent | rect. | 2 | 23 |
| 671 | 145.47 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 7 |
| 674 | 145.49 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 700 | 145.68 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 726 | 145.75 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 753 | 145.86 | humidity | 90 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 770 | 146.01 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 772 | 146.02 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 773 | 146.03 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 778 | 146.04 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 7 |
| 867 | 146.24 | temperature | 20 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 877 | 146.27 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 878 | 146.27 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 895 | 146.37 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 896 | 146.37 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 927 | 146.53 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 960 | 146.68 | temperature | 25 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 975 | 146.78 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 986 | 146.79 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 992 | 146.85 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 18 |
| 997 | 146.87 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 13 |