Os04g0469700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0469700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.77 | 0.541 | 7.1 | 1.03 | 1.61 | 0.437 | -0.416 | -2.45 | 0.742 | 19.8 | 26.04 | 10 | -- | -- |
| 140.29 | 0.552 | 7.15 | 0.676 | 1.61 | 1.04 | -0.625 | -- | 0.617 | 19.9 | 20.9 | 112 | -- | -- |
| 133.08 | 0.541 | 7.1 | 1.05 | 1.61 | 0.451 | -- | -2.52 | 0.746 | 19.7 | 26.04 | 10 | -- | -- |
| 141.58 | 0.554 | 7.15 | 0.709 | 1.62 | 1.07 | -- | -- | 0.615 | 19.8 | 20.9 | 114 | -- | -- |
| 270.45 | 0.766 | 7.05 | 1.01 | -- | 0.768 | -- | -2.19 | 0.734 | -- | 24.1 | 2 | -- | -- |
| 148.14 | 0.571 | 7.17 | 0.494 | 1.61 | -- | -0.822 | -- | 0.531 | 20.1 | -- | -- | -- | -- |
| 150.1 | 0.574 | 7.17 | 0.518 | 1.62 | -- | -- | -- | 0.532 | 20 | -- | -- | -- | -- |
| 276.78 | 0.775 | 7.1 | 0.721 | -- | 1.05 | -- | -- | 0.66 | -- | 23.5 | 2 | -- | -- |
| 153.37 | 0.58 | 7.18 | -- | 1.6 | 0.65 | -- | -- | 0.516 | 19.9 | 21.07 | 117 | -- | -- |
| 293.13 | 0.8 | 7.13 | 0.502 | -- | -- | -- | -- | 0.511 | -- | -- | -- | -- | -- |
| 157.19 | 0.586 | 7.19 | -- | 1.62 | -- | -- | -- | 0.474 | 20 | -- | -- | -- | -- |
| 289.49 | 0.792 | 7.12 | -- | -- | 0.813 | -- | -- | 0.551 | -- | 23.4 | 2 | -- | -- |
| 299.79 | 0.808 | 7.14 | -- | -- | -- | -- | -- | 0.455 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.76 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 2 | 128.85 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 3 | 128.91 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 21 |
| 10 | 129.49 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 11 | 129.58 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 21 |
| 16 | 129.72 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 20 | 129.81 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 40 | 130.41 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 47 | 130.49 | temperature | 25.0 | 270 | > th | dose independent | rect. | 9 | 7 |
| 48 | 130.51 | temperature | 25.0 | 270 | > th | dose independent | rect. | 24 | 16 |
| 63 | 130.67 | temperature | 25.0 | 270 | > th | dose independent | rect. | 4 | 12 |
| 86 | 131.02 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 87 | 131.05 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 16 | 14 |
| 110 | 131.20 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 16 |
| 120 | 131.26 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 161 | 131.63 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 18 | 3 |
| 166 | 131.66 | radiation | 1.0 | 720 | < th | dose independent | rect. | 7 | 17 |
| 185 | 131.77 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 17 | 5 |
| 193 | 131.82 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 11 | 12 |
| 206 | 131.90 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 213 | 131.94 | wind | 5.0 | 270 | < th | dose independent | rect. | 22 | 19 |
| 214 | 131.94 | wind | 1.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 215 | 131.94 | wind | 9.0 | 43200 | < th | dose dependent | sin | 13 | NA |
| 216 | 131.94 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 224 | 131.98 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 225 | 131.99 | wind | 5.0 | 270 | < th | dose independent | rect. | 11 | 6 |
| 249 | 132.08 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 12 | 20 |
| 263 | 132.12 | wind | 3.0 | 43200 | > th | dose independent | rect. | 16 | 14 |
| 266 | 132.12 | wind | 3.0 | 43200 | < th | dose independent | rect. | 15 | 16 |
| 269 | 132.12 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 20 |
| 285 | 132.17 | wind | 3.0 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 290 | 132.17 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 15 | 22 |
| 308 | 132.22 | temperature | 25.0 | 270 | < th | dose independent | rect. | 11 | 18 |
| 346 | 132.29 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 356 | 132.32 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 20 |
| 362 | 132.33 | wind | 9.0 | 270 | < th | dose dependent | rect. | 11 | 6 |
| 364 | 132.33 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 22 |
| 428 | 132.41 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 471 | 132.48 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 20 | 23 |
| 490 | 132.52 | wind | 5.0 | 43200 | < th | dose dependent | no | NA | NA |
| 502 | 132.53 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 528 | 132.56 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 20 |
| 610 | 132.67 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 21 |
| 635 | 132.69 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 646 | 132.71 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 653 | 132.72 | temperature | 25.0 | 10 | < th | dose dependent | sin | 16 | NA |
| 671 | 132.75 | wind | 3.0 | 43200 | > th | dose independent | rect. | 15 | 22 |
| 672 | 132.75 | wind | 3.0 | 43200 | < th | dose independent | rect. | 15 | 22 |
| 673 | 132.75 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 684 | 132.76 | humidity | 80.0 | 10 | > th | dose independent | rect. | 23 | 21 |
| 707 | 132.78 | temperature | 20.0 | 90 | > th | dose independent | rect. | 18 | 19 |
| 763 | 132.84 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 773 | 132.85 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 16 |
| 792 | 132.88 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 17 |
| 796 | 132.88 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 809 | 132.89 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 821 | 132.90 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 19 |
| 822 | 132.90 | wind | 1.0 | 43200 | > th | dose dependent | no | NA | NA |
| 832 | 132.91 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 20 |
| 849 | 132.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 18 |
| 855 | 132.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 18 |
| 861 | 132.92 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 23 |
| 877 | 132.94 | wind | 3.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 892 | 132.95 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 22 |
| 904 | 132.96 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 22 |
| 913 | 132.97 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 921 | 132.98 | wind | 3.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 922 | 132.98 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 954 | 133.00 | temperature | 25.0 | 720 | < th | dose independent | rect. | 12 | 10 |
| 998 | 133.04 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 999 | 133.04 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 1000 | 133.04 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 23 |