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Os04g0462500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to 14-3-3-like protein GF14-6.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.8 (0.0263) R2 : 0.417
β1 : 0.817 (0.0955) R2dD : 0.0899 R2D : -0.136
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.53 (0.0974) R2dE : 0.334 R2E : 0.0182
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.84 (0.0574) R2dN8 : 0.374 R2N8 : -0.0138
σ : 0.488
deviance : 109.66
__
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C
peak time of C : --
E
wheather : radiation
threshold : 3.74
memory length : 1643
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.73 0.457 13.9 0.824 0.938 1.05 -0.147 -0.992 0.717 0.602 19.86 1249 -- --
96.57 0.458 13.9 0.763 0.966 1.05 0.0301 -- 0.695 0.28 19.71 1199 -- --
94.79 0.453 13.9 0.828 0.936 1.05 -- -0.96 0.72 0.582 19.89 1243 -- --
96.57 0.458 13.9 0.757 0.965 1.06 -- -- 0.691 0.306 19.71 1199 -- --
116.01 0.502 13.8 0.948 -- 1.21 -- 0.712 0.838 -- 3.817 1669 -- --
130.9 0.536 14 0.673 0.698 -- -0.093 -- 0.482 1.28 -- -- -- --
130.93 0.536 14 0.676 0.698 -- -- -- 0.482 1.26 -- -- -- --
109.66 0.488 13.8 0.817 -- 1.53 -- -- 0.84 -- 3.74 1643 -- --
111.47 0.492 14 -- 0.976 1 -- -- 0.607 0.425 20 1203 -- --
161.01 0.593 14 0.703 -- -- -- -- 0.497 -- -- -- -- --
142.97 0.559 14 -- 0.709 -- -- -- 0.407 1.3 -- -- -- --
124.07 0.519 13.9 -- -- 1.75 -- -- 0.782 -- 4.84 1651 -- --
174.05 0.616 14 -- -- -- -- -- 0.419 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 93.26 radiation 20 1440 < th dose dependent rect. 11 1
2 93.96 radiation 20 1440 < th dose independent rect. 11 2
4 95.67 wind 3 43200 > th dose dependent rect. 7 1
9 96.99 radiation 10 1440 > th dose independent rect. 8 5
12 97.06 radiation 20 1440 < th dose independent rect. 11 22
13 97.20 wind 3 43200 > th dose independent rect. 7 1
15 97.51 humidity 90 14400 > th dose independent rect. 22 1
16 97.52 radiation 10 1440 < th dose dependent rect. 8 10
17 97.54 radiation 10 1440 > th dose independent rect. 6 7
22 97.61 radiation 20 1440 < th dose dependent rect. 8 8
37 97.71 radiation 20 1440 < th dose dependent rect. 8 16
40 97.73 radiation 20 1440 < th dose dependent rect. 8 20
41 97.74 radiation 20 1440 < th dose dependent rect. 8 13
50 97.87 wind 3 43200 < th dose independent rect. 7 1
51 97.87 radiation 20 1440 < th dose dependent rect. 8 6
57 97.98 radiation 20 1440 < th dose independent rect. 8 5
85 98.09 radiation 20 1440 < th dose independent rect. 7 7
106 98.30 radiation 20 1440 < th dose independent rect. 16 22
110 98.32 radiation 20 1440 < th dose dependent sin 23 NA
115 98.45 radiation 20 1440 < th dose independent rect. 19 19
121 98.47 radiation 20 1440 < th dose independent rect. 3 11
126 98.48 radiation 20 1440 < th dose independent rect. 22 16
143 98.63 radiation 20 1440 < th dose dependent rect. 11 23
146 98.70 wind 9 43200 < th dose dependent rect. 3 6
148 98.71 temperature 10 14400 > th dose dependent rect. 17 1
151 98.72 wind 3 43200 > th dose independent rect. 3 6
156 98.74 radiation 10 1440 > th dose independent sin 4 NA
192 98.84 temperature 30 14400 < th dose dependent rect. 17 1
196 98.85 wind 5 43200 < th dose independent rect. 5 5
219 98.93 radiation 20 1440 < th dose independent rect. 7 17
224 98.94 radiation 20 1440 < th dose independent sin 1 NA
228 98.95 radiation 20 1440 < th dose independent rect. 7 21
230 98.96 radiation 20 1440 < th dose independent rect. 11 5
242 98.97 radiation 20 1440 < th dose independent rect. 7 12
249 99.01 wind 9 43200 < th dose dependent rect. 7 2
282 99.09 wind 3 43200 < th dose independent rect. 3 6
340 99.20 radiation 20 1440 < th dose independent rect. 11 13
373 99.22 radiation 20 1440 < th dose independent no NA NA
409 99.23 radiation 20 1440 < th dose independent rect. 23 22
453 99.26 radiation 20 1440 < th dose independent rect. 11 8
499 99.30 radiation 20 1440 < th dose dependent rect. 17 23
515 99.35 temperature 15 4320 > th dose dependent rect. 10 1
530 99.37 radiation 20 1440 < th dose dependent rect. 19 23
538 99.39 radiation 20 1440 < th dose dependent rect. 3 15
541 99.39 radiation 20 1440 < th dose dependent rect. 22 20
588 99.49 radiation 10 1440 > th dose independent rect. 11 23
596 99.50 radiation 20 1440 < th dose dependent rect. 3 21
621 99.53 radiation 20 1440 < th dose dependent no NA NA
643 99.54 humidity 90 14400 > th dose independent rect. 21 3
656 99.54 radiation 20 1440 < th dose dependent rect. 22 23
716 99.63 humidity 90 14400 < th dose independent rect. 21 2
724 99.64 temperature 30 14400 < th dose dependent rect. 20 1
798 99.76 humidity 80 14400 < th dose independent rect. 17 1
817 99.79 temperature 10 14400 > th dose dependent sin 19 NA
825 99.80 humidity 80 14400 > th dose dependent rect. 17 2
831 99.80 radiation 20 1440 < th dose dependent rect. 15 23
832 99.81 humidity 90 14400 < th dose independent rect. 13 12
833 99.81 humidity 90 14400 > th dose independent rect. 12 14
872 99.88 humidity 80 14400 > th dose independent rect. 17 1
963 99.98 humidity 80 14400 > th dose dependent rect. 13 10
976 99.99 radiation 20 1440 < th dose dependent rect. 11 5
988 100.01 wind 9 43200 > th dose independent rect. 20 11