Os04g0458800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0458800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145.17 | 0.561 | 2.96 | 0.447 | 0.00346 | 26.9 | -0.582 | 122 | -0.0444 | 2.6 | 7 | 90 | 4 | 5 |
| 843.94 | 1.35 | 3.13 | 0.171 | 0.315 | 25.3 | 0.577 | -- | -0.243 | 23.7 | 7.235 | 95 | 4.12 | 5.03 |
| 146.22 | 0.563 | 2.94 | 0.489 | 0.0636 | 27.4 | -- | 124 | -0.0166 | 6.13 | 7.001 | 91 | 4.02 | 4.99 |
| 188.91 | 0.64 | 2.92 | -0.297 | 0.11 | 1.85 | -- | -- | -0.0737 | 13.3 | 10.47 | 169 | 9.15 | 0.794 |
| 146.34 | 0.563 | 2.95 | 0.462 | -- | 27.6 | -- | 125 | -0.0305 | -- | 7 | 91 | 4.03 | 5 |
| 183.97 | 0.636 | 2.87 | -0.0344 | 0.098 | -- | 0.537 | -- | -0.0636 | 11.6 | -- | -- | -- | -- |
| 184.8 | 0.637 | 2.87 | -0.0156 | 0.132 | -- | -- | -- | -0.0635 | 8.76 | -- | -- | -- | -- |
| 184.59 | 0.633 | 2.87 | -0.00562 | -- | 1.1 | -- | -- | -0.0582 | -- | 10.37 | 147 | 9.16 | 0.39 |
| 183.72 | 0.631 | 2.86 | -- | 0.125 | 1.04 | -- | -- | -0.0588 | 8.7 | 10.49 | 137 | 9.15 | 1.16 |
| 185.79 | 0.637 | 2.87 | -0.0154 | -- | -- | -- | -- | -0.0625 | -- | -- | -- | -- | -- |
| 184.81 | 0.636 | 2.86 | -- | 0.132 | -- | -- | -- | -0.0618 | 8.76 | -- | -- | -- | -- |
| 184.6 | 0.633 | 2.87 | -- | -- | 1.1 | -- | -- | -0.0577 | -- | 10.37 | 146 | 9.16 | 0.282 |
| 185.8 | 0.636 | 2.87 | -- | -- | -- | -- | -- | -0.0607 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.17 | wind | 7.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 2 | 146.41 | wind | 7.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 4 | 146.59 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 5 | 146.61 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 43 | 165.62 | wind | 5.0 | 90 | > th | dose independent | rect. | 22 | 12 |
| 48 | 167.02 | radiation | 20.0 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 65 | 167.48 | wind | 5.0 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 66 | 167.52 | radiation | 20.0 | 270 | > th | dose independent | rect. | 6 | 1 |
| 80 | 167.94 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 4 | 14 |
| 84 | 167.96 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 5 | 13 |
| 101 | 168.70 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 124 | 169.33 | precipitation | 0.1 | 10 | < th | dose independent | sin | 0 | NA |
| 126 | 169.33 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 0 | NA |
| 130 | 169.50 | precipitation | 0.1 | 10 | > th | dose independent | sin | 0 | NA |
| 138 | 169.71 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 0 | NA |
| 144 | 170.10 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 232 | 172.73 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 4 | 10 |
| 241 | 172.74 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 5 | 9 |
| 246 | 172.77 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 4 | 4 |
| 252 | 172.77 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 286 | 172.79 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 302 | 172.80 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 327 | 172.85 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 328 | 172.86 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 1 | 17 |
| 372 | 173.09 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 1 | 18 |
| 460 | 173.81 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 3 | NA |
| 489 | 174.07 | wind | 5.0 | 90 | > th | dose independent | rect. | 17 | 17 |
| 577 | 174.84 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 584 | 174.95 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 589 | 175.00 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 631 | 175.38 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 17 | 13 |
| 640 | 175.40 | wind | 5.0 | 90 | < th | dose independent | sin | 8 | NA |
| 644 | 175.43 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 690 | 175.44 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 695 | 175.44 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 729 | 175.57 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 17 |
| 753 | 175.63 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 767 | 175.66 | wind | 5.0 | 90 | > th | dose independent | sin | 8 | NA |
| 787 | 175.77 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 22 |
| 832 | 175.94 | precipitation | 0.1 | 90 | > th | dose dependent | no | NA | NA |
| 833 | 175.94 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 22 |
| 866 | 176.05 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 14 |
| 900 | 176.20 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 1 | 5 |
| 906 | 176.21 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 970 | 176.41 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 6 |
| 988 | 176.46 | wind | 9.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 992 | 176.46 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 1 |