Os04g0454200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Monosaccharide transporter 1.
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Os04g0454200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Monosaccharide transporter 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 793.73 | 1.32 | 11.7 | -5.29 | 1.96 | -4.43 | 4.74 | -3.57 | -0.728 | 7.33 | 72.34 | 1227 | -- | -- |
| 821.8 | 1.34 | 11.7 | -5.65 | 2.06 | -4.47 | 4.72 | -- | -0.776 | 7.09 | 73 | 1223 | -- | -- |
| 850.73 | 1.36 | 11.7 | -5.2 | 1.92 | -4.33 | -- | -3.19 | -0.734 | 6.89 | 72.12 | 1243 | -- | -- |
| 872.06 | 1.38 | 11.8 | -5.73 | 1.92 | -4.53 | -- | -- | -0.888 | 6.9 | 73 | 1242 | -- | -- |
| 1019.33 | 1.49 | 11.8 | -5.01 | -- | -4.43 | -- | -3.82 | -0.733 | -- | 73.42 | 1306 | -- | -- |
| 1529.02 | 1.83 | 11.7 | -4.86 | 2.17 | -- | 3.78 | -- | -0.297 | 5.44 | -- | -- | -- | -- |
| 1562.46 | 1.85 | 11.7 | -4.85 | 2.2 | -- | -- | -- | -0.315 | 5.12 | -- | -- | -- | -- |
| 1047.34 | 1.51 | 11.9 | -5.68 | -- | -4.56 | -- | -- | -0.889 | -- | 72.75 | 1301 | -- | -- |
| 1656.44 | 1.9 | 11.6 | -- | 2.21 | -5.3 | -- | -- | -0.126 | 6.61 | 76 | 2602 | -- | -- |
| 1815.9 | 1.99 | 11.7 | -4.77 | -- | -- | -- | -- | -0.26 | -- | -- | -- | -- | -- |
| 2182.51 | 2.19 | 11.6 | -- | 2.12 | -- | -- | -- | 0.225 | 5.2 | -- | -- | -- | -- |
| 1783.8 | 1.97 | 11.8 | -- | -- | -6.24 | -- | -- | -0.64 | -- | 82.99 | 2655 | -- | -- |
| 2416.61 | 2.29 | 11.6 | -- | -- | -- | -- | -- | 0.27 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 835.10 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 2 | 836.37 | humidity | 60 | 1440 | > th | dose dependent | rect. | 6 | 15 |
| 3 | 836.73 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 35 | 842.50 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 62 | 846.23 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 67 | 846.86 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 85 | 848.57 | humidity | 60 | 1440 | > th | dose dependent | sin | 0 | NA |
| 89 | 849.19 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 104 | 851.07 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 18 |
| 218 | 858.97 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 224 | 859.34 | humidity | 90 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 300 | 863.21 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 356 | 867.45 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 372 | 868.45 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 380 | 869.11 | humidity | 90 | 1440 | < th | dose dependent | sin | 0 | NA |
| 392 | 869.89 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 453 | 874.44 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 559 | 882.00 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 581 | 882.83 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 692 | 890.37 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 19 |
| 751 | 892.66 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 763 | 892.73 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 930 | 896.99 | humidity | 70 | 1440 | < th | dose independent | rect. | 14 | 22 |