Os04g0453200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Monosaccharide transporter 1.
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Os04g0453200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Monosaccharide transporter 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.08 | 0.572 | 8.08 | -2.46 | 2.64 | 0.927 | 0.372 | -1.96 | -1.2 | 5.76 | 1.305 | 757 | -- | -- |
| 153.98 | 0.578 | 8.11 | -2.44 | 2.62 | 0.761 | 0.531 | -- | -1.15 | 5.78 | 1.3 | 769 | -- | -- |
| 148.4 | 0.567 | 8.08 | -2.45 | 2.64 | 0.936 | -- | -2.05 | -1.21 | 5.77 | 1.3 | 756 | -- | -- |
| 154.57 | 0.579 | 8.11 | -2.5 | 2.63 | 0.699 | -- | -- | -1.17 | 5.71 | 1.3 | 769 | -- | -- |
| 389.21 | 0.924 | 8.14 | -2.92 | -- | -1.09 | -- | 0.00789 | -1.06 | -- | 3.8 | 4164 | -- | -- |
| 161.5 | 0.596 | 8.1 | -2.69 | 2.5 | -- | 0.557 | -- | -1.07 | 5.51 | -- | -- | -- | -- |
| 162.27 | 0.597 | 8.1 | -2.69 | 2.5 | -- | -- | -- | -1.08 | 5.51 | -- | -- | -- | -- |
| 380.39 | 0.912 | 8.14 | -2.98 | -- | -1.13 | -- | -- | -1.03 | -- | 3.418 | 1203 | -- | -- |
| 299.14 | 0.806 | 8.11 | -- | 2.57 | 1.59 | -- | -- | -1.13 | 5.72 | 1.401 | 1016 | -- | -- |
| 487.16 | 1.03 | 8.13 | -2.61 | -- | -- | -- | -- | -1.02 | -- | -- | -- | -- | -- |
| 352.98 | 0.879 | 8.03 | -- | 2.46 | -- | -- | -- | -0.777 | 5.56 | -- | -- | -- | -- |
| 597.65 | 1.14 | 8.07 | -- | -- | 1.71 | -- | -- | -0.926 | -- | 1.899 | 9634 | -- | -- |
| 666.52 | 1.21 | 8.07 | -- | -- | -- | -- | -- | -0.726 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.19 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 16 |
| 4 | 142.92 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 17 | 145.04 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 19 | 145.23 | atmosphere | 1010 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 21 | 145.26 | temperature | 25 | 270 | > th | dose independent | rect. | 11 | 14 |
| 22 | 145.48 | atmosphere | 1010 | 720 | < th | dose independent | rect. | 22 | 3 |
| 23 | 145.51 | atmosphere | 1010 | 720 | < th | dose independent | rect. | 22 | 1 |
| 27 | 145.63 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 7 | 3 |
| 28 | 145.64 | atmosphere | 1010 | 1440 | < th | dose independent | rect. | 7 | 3 |
| 40 | 145.88 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 5 |
| 46 | 146.13 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 18 |
| 48 | 146.17 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 6 |
| 60 | 146.46 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 16 |
| 71 | 146.65 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 6 |
| 75 | 146.76 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 2 |
| 81 | 146.92 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 3 | 13 |
| 83 | 146.96 | wind | 1 | 720 | > th | dose independent | rect. | 17 | 22 |
| 86 | 146.98 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 98 | 147.11 | atmosphere | 1005 | 10 | > th | dose dependent | sin | 5 | NA |
| 102 | 147.14 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 2 |
| 106 | 147.19 | humidity | 60 | 30 | > th | dose independent | rect. | 3 | 21 |
| 109 | 147.23 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 3 | 21 |
| 111 | 147.27 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 112 | 147.28 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 3 | 11 |
| 120 | 147.36 | wind | 1 | 720 | > th | dose independent | rect. | 23 | 23 |
| 126 | 147.39 | temperature | 30 | 30 | < th | dose independent | rect. | 3 | 21 |
| 141 | 147.60 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 3 | 15 |
| 143 | 147.61 | humidity | 70 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 150 | 147.67 | temperature | 25 | 270 | > th | dose independent | rect. | 9 | 21 |
| 171 | 147.81 | temperature | 20 | 30 | > th | dose dependent | rect. | 7 | 20 |
| 176 | 147.86 | wind | 1 | 720 | > th | dose independent | rect. | 2 | 18 |
| 182 | 147.88 | humidity | 70 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 195 | 147.94 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 207 | 148.00 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 21 |
| 210 | 148.03 | radiation | 10 | 43200 | > th | dose independent | rect. | 16 | 16 |
| 215 | 148.05 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 8 |
| 216 | 148.05 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 19 |
| 217 | 148.05 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 6 |
| 228 | 148.09 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 229 | 148.09 | radiation | 1 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 235 | 148.13 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 14 |
| 250 | 148.23 | wind | 1 | 720 | > th | dose independent | rect. | 3 | 2 |
| 256 | 148.25 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 19 |
| 269 | 148.34 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 272 | 148.35 | humidity | 50 | 43200 | < th | dose independent | sin | 11 | NA |
| 273 | 148.35 | wind | 1 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 274 | 148.35 | humidity | 50 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 275 | 148.35 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 2 |
| 277 | 148.37 | humidity | 50 | 43200 | > th | dose independent | sin | 11 | NA |
| 286 | 148.40 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 287 | 148.41 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 288 | 148.42 | humidity | 80 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 289 | 148.42 | atmosphere | 1010 | 720 | < th | dose independent | rect. | 6 | 19 |
| 294 | 148.44 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 24 | 3 |
| 308 | 148.49 | radiation | 20 | 43200 | < th | dose dependent | rect. | 17 | 18 |
| 324 | 148.53 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 15 |
| 327 | 148.54 | radiation | 10 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 343 | 148.56 | radiation | 20 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 347 | 148.57 | temperature | 20 | 10 | > th | dose dependent | sin | 15 | NA |
| 350 | 148.58 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 357 | 148.60 | humidity | 60 | 43200 | > th | dose independent | rect. | 18 | 19 |
| 358 | 148.61 | radiation | 20 | 43200 | > th | dose independent | rect. | 15 | 20 |
| 365 | 148.62 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 4 |
| 373 | 148.64 | humidity | 50 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 374 | 148.64 | humidity | 60 | 43200 | > th | dose independent | rect. | 21 | 16 |
| 375 | 148.64 | humidity | 50 | 43200 | < th | dose dependent | rect. | 16 | 18 |
| 381 | 148.65 | radiation | 20 | 43200 | < th | dose dependent | rect. | 6 | 5 |
| 382 | 148.65 | radiation | 20 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 397 | 148.67 | radiation | 20 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 398 | 148.67 | humidity | 60 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 400 | 148.67 | humidity | 60 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 433 | 148.71 | wind | 3 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 434 | 148.71 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 438 | 148.72 | wind | 3 | 4320 | > th | dose independent | rect. | 9 | 3 |
| 448 | 148.74 | atmosphere | 1010 | 90 | < th | dose independent | rect. | 11 | 16 |
| 450 | 148.75 | radiation | 40 | 43200 | > th | dose independent | sin | 13 | NA |
| 455 | 148.76 | humidity | 50 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 464 | 148.77 | humidity | 50 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 475 | 148.79 | wind | 1 | 43200 | > th | dose independent | rect. | 18 | 8 |
| 479 | 148.79 | radiation | 40 | 43200 | > th | dose independent | rect. | 12 | 21 |
| 485 | 148.80 | temperature | 25 | 270 | > th | dose independent | sin | 17 | NA |
| 489 | 148.80 | radiation | 20 | 43200 | < th | dose dependent | sin | 8 | NA |
| 514 | 148.82 | radiation | 40 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 525 | 148.82 | wind | 1 | 720 | > th | dose independent | rect. | 17 | 14 |
| 548 | 148.82 | radiation | 20 | 43200 | < th | dose dependent | rect. | 9 | 23 |
| 549 | 148.83 | temperature | 25 | 270 | > th | dose independent | rect. | 5 | 20 |
| 555 | 148.83 | radiation | 20 | 43200 | < th | dose dependent | rect. | 1 | 18 |
| 558 | 148.83 | radiation | 20 | 43200 | < th | dose dependent | rect. | 23 | 20 |
| 560 | 148.83 | radiation | 20 | 43200 | < th | dose dependent | rect. | 21 | 22 |
| 561 | 148.83 | radiation | 20 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 564 | 148.84 | radiation | 20 | 43200 | < th | dose dependent | no | NA | NA |
| 571 | 148.84 | radiation | 20 | 43200 | < th | dose dependent | rect. | 6 | 13 |
| 657 | 148.86 | humidity | 50 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 675 | 148.88 | radiation | 20 | 43200 | > th | dose independent | sin | 11 | NA |
| 676 | 148.88 | humidity | 50 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 677 | 148.88 | radiation | 20 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 704 | 148.89 | wind | 1 | 720 | > th | dose independent | rect. | 21 | 23 |
| 714 | 148.90 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 20 | 11 |
| 735 | 148.91 | radiation | 40 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 767 | 148.93 | radiation | 20 | 43200 | > th | dose independent | no | NA | NA |
| 769 | 148.93 | radiation | 20 | 43200 | > th | dose independent | rect. | 6 | 11 |
| 775 | 148.93 | humidity | 50 | 43200 | > th | dose independent | rect. | 15 | 14 |
| 825 | 148.93 | wind | 1 | 720 | > th | dose independent | rect. | 1 | 21 |
| 890 | 148.93 | temperature | 10 | 30 | > th | dose dependent | rect. | 20 | 23 |
| 913 | 148.94 | humidity | 50 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 927 | 148.94 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 955 | 148.96 | temperature | 20 | 10 | > th | dose independent | rect. | 11 | 17 |
| 973 | 148.97 | radiation | 40 | 43200 | > th | dose independent | rect. | 14 | 20 |
| 989 | 148.98 | radiation | 20 | 43200 | > th | dose independent | sin | 5 | NA |
| 991 | 148.98 | radiation | 30 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 993 | 148.98 | humidity | 50 | 43200 | > th | dose independent | rect. | 15 | 7 |