Os04g0452700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Monosaccharide transporter 1.
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Os04g0452700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Monosaccharide transporter 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 333.75 | 0.858 | 8.53 | 4.06 | 2.62 | -2.39 | -1.06 | 2.38 | 1.15 | 1.39 | 25.47 | 1500 | -- | -- |
| 336.55 | 0.854 | 8.66 | 3.47 | 2.6 | -2.26 | -1.08 | -- | 0.93 | 1.4 | 25.71 | 1529 | -- | -- |
| 338.07 | 0.856 | 8.53 | 4.1 | 2.63 | -2.41 | -- | 2.44 | 1.12 | 1.36 | 25.71 | 1498 | -- | -- |
| 339.82 | 0.859 | 8.63 | 3.45 | 2.62 | -2.2 | -- | -- | 0.926 | 1.35 | 25.79 | 1512 | -- | -- |
| 566.93 | 1.12 | 8.52 | 3.77 | -- | -4.26 | -- | 4.75 | 1.12 | -- | 25.66 | 1718 | -- | -- |
| 530.82 | 1.08 | 8.66 | 2.64 | 2.5 | -- | -1.33 | -- | 0.773 | 1.42 | -- | -- | -- | -- |
| 537.95 | 1.09 | 8.66 | 2.69 | 2.5 | -- | -- | -- | 0.781 | 1.37 | -- | -- | -- | -- |
| 573.7 | 1.12 | 8.58 | 3.3 | -- | -3.9 | -- | -- | 1.01 | -- | 25.6 | 1718 | -- | -- |
| 621.2 | 1.16 | 8.77 | -- | 2.63 | -1.8 | -- | -- | 0.27 | 1.29 | 28.7 | 1712 | -- | -- |
| 923.04 | 1.42 | 8.62 | 2.79 | -- | -- | -- | -- | 0.833 | -- | -- | -- | -- | -- |
| 728.76 | 1.26 | 8.72 | -- | 2.55 | -- | -- | -- | 0.481 | 1.41 | -- | -- | -- | -- |
| 822.12 | 1.34 | 8.6 | -- | -- | -3.45 | -- | -- | 0.921 | -- | 23.21 | 15 | -- | -- |
| 1128.23 | 1.57 | 8.69 | -- | -- | -- | -- | -- | 0.524 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 332.57 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 11 |
| 3 | 332.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 30 | 333.61 | temperature | 25 | 1440 | > th | dose dependent | sin | 0 | NA |
| 143 | 335.48 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 166 | 335.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 167 | 335.73 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 203 | 336.71 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 210 | 336.81 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 247 | 338.28 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 274 | 339.34 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 14 |
| 277 | 339.37 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 12 |
| 281 | 339.46 | temperature | 30 | 1440 | < th | dose independent | rect. | 19 | 21 |
| 282 | 339.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 298 | 339.74 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 299 | 339.75 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 300 | 339.75 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 15 |
| 304 | 339.77 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 305 | 339.77 | temperature | 30 | 14400 | < th | dose independent | rect. | 20 | 21 |
| 312 | 339.79 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 9 |
| 318 | 339.85 | temperature | 30 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 320 | 339.87 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 371 | 340.16 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 379 | 340.20 | temperature | 30 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 389 | 340.31 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 21 |
| 416 | 340.68 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 417 | 340.69 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 22 |
| 418 | 340.71 | temperature | 30 | 14400 | < th | dose independent | sin | 1 | NA |
| 430 | 340.82 | temperature | 30 | 14400 | > th | dose independent | sin | 1 | NA |
| 448 | 341.00 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 17 |
| 450 | 341.00 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 19 |
| 461 | 341.01 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 17 |
| 473 | 341.02 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 15 |
| 486 | 341.02 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 487 | 341.02 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 23 |
| 490 | 341.03 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 494 | 341.03 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 13 |
| 506 | 341.03 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 21 |
| 513 | 341.03 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 532 | 341.04 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 21 |
| 553 | 341.05 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 564 | 341.10 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 582 | 341.15 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 688 | 341.16 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 692 | 341.18 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 784 | 341.49 | temperature | 30 | 1440 | < th | dose independent | sin | 3 | NA |
| 814 | 341.85 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 839 | 342.19 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 845 | 342.28 | temperature | 30 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 881 | 342.37 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 982 | 342.84 | temperature | 30 | 14400 | > th | dose dependent | rect. | 18 | 22 |