Os04g0452600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Monosaccharide transporter 1.
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Os04g0452600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Monosaccharide transporter 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 195.26 | 0.657 | 6.59 | 3.42 | 2 | -3.53 | 1.1 | 3.37 | 0.376 | 3.38 | 22.13 | 4622 | -- | -- |
| 201.48 | 0.661 | 6.7 | 2.56 | 2 | -3.42 | 1.06 | -- | 0.211 | 3.39 | 21.1 | 4635 | -- | -- |
| 199.02 | 0.657 | 6.6 | 3.4 | 2.01 | -3.52 | -- | 3.38 | 0.364 | 3.44 | 22.12 | 4619 | -- | -- |
| 204.96 | 0.667 | 6.7 | 2.56 | 2.01 | -3.43 | -- | -- | 0.208 | 3.45 | 21.1 | 4619 | -- | -- |
| 311.24 | 0.826 | 6.68 | 2.16 | -- | -4.31 | -- | 1.56 | 0.291 | -- | 22.12 | 4619 | -- | -- |
| 541.85 | 1.09 | 6.85 | 1.06 | 1.93 | -- | 0.911 | -- | -0.466 | 3.59 | -- | -- | -- | -- |
| 544.34 | 1.09 | 6.85 | 1.05 | 1.94 | -- | -- | -- | -0.472 | 3.64 | -- | -- | -- | -- |
| 302.57 | 0.814 | 6.7 | 1.96 | -- | -4.35 | -- | -- | 0.275 | -- | 20.69 | 4752 | -- | -- |
| 344.23 | 0.864 | 6.8 | -- | 2.17 | -2.43 | -- | -- | -0.228 | 3.46 | 22.6 | 3006 | -- | -- |
| 753.67 | 1.28 | 6.86 | 1.13 | -- | -- | -- | -- | -0.42 | -- | -- | -- | -- | -- |
| 573.33 | 1.12 | 6.88 | -- | 1.96 | -- | -- | -- | -0.589 | 3.64 | -- | -- | -- | -- |
| 400.22 | 0.935 | 6.76 | -- | -- | -3.95 | -- | -- | 0.00222 | -- | 20.69 | 4752 | -- | -- |
| 787.35 | 1.31 | 6.88 | -- | -- | -- | -- | -- | -0.545 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 196.50 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 13 |
| 14 | 197.19 | temperature | 20 | 4320 | > th | dose dependent | sin | 22 | NA |
| 18 | 197.27 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 6 |
| 78 | 199.12 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 177 | 201.21 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 6 |
| 198 | 201.68 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 273 | 202.75 | temperature | 20 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 282 | 202.85 | temperature | 10 | 4320 | > th | dose dependent | rect. | 9 | 11 |
| 314 | 203.20 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 350 | 203.52 | temperature | 10 | 4320 | > th | dose dependent | sin | 21 | NA |
| 377 | 203.77 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 23 |
| 383 | 203.82 | temperature | 20 | 4320 | > th | dose dependent | rect. | 12 | 23 |
| 401 | 204.09 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 603 | 206.35 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 691 | 207.33 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 931 | 209.77 | temperature | 30 | 4320 | < th | dose dependent | rect. | 15 | 5 |
| 966 | 210.19 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 4 |