Os04g0451000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0451000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.66 | 0.539 | 6.75 | 0.835 | 0.404 | 1.82 | 0.411 | -0.0388 | -0.176 | 8.04 | 22.23 | 2212 | -- | -- |
| 131.2 | 0.533 | 6.75 | 0.821 | 0.409 | 1.82 | 0.465 | -- | -0.181 | 8.48 | 22.3 | 2071 | -- | -- |
| 131.69 | 0.534 | 6.76 | 0.792 | 0.412 | 1.83 | -- | 0.155 | -0.207 | 8.66 | 22.16 | 2045 | -- | -- |
| 131.69 | 0.534 | 6.75 | 0.832 | 0.427 | 1.82 | -- | -- | -0.198 | 8.8 | 22.13 | 1977 | -- | -- |
| 140.87 | 0.553 | 6.76 | 0.827 | -- | 1.88 | -- | 0.123 | -0.183 | -- | 22.12 | 2107 | -- | -- |
| 249.43 | 0.74 | 6.89 | 0.072 | 0.526 | -- | 0.408 | -- | -0.822 | 8.91 | -- | -- | -- | -- |
| 249.98 | 0.74 | 6.89 | 0.0865 | 0.523 | -- | -- | -- | -0.822 | 9.02 | -- | -- | -- | -- |
| 140.88 | 0.553 | 6.76 | 0.843 | -- | 1.85 | -- | -- | -0.167 | -- | 22.23 | 2120 | -- | -- |
| 146.3 | 0.563 | 6.79 | -- | 0.486 | 1.57 | -- | -- | -0.357 | 8.72 | 22.3 | 1923 | -- | -- |
| 265.72 | 0.762 | 6.9 | 0.0857 | -- | -- | -- | -- | -0.818 | -- | -- | -- | -- | -- |
| 250.18 | 0.74 | 6.89 | -- | 0.524 | -- | -- | -- | -0.831 | 9 | -- | -- | -- | -- |
| 156.74 | 0.583 | 6.79 | -- | -- | 1.6 | -- | -- | -0.311 | -- | 22.41 | 2123 | -- | -- |
| 265.92 | 0.761 | 6.91 | -- | -- | -- | -- | -- | -0.828 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 17 | 136.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 23 | 136.34 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 27 | 136.45 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 29 | 136.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 67 | 137.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 83 | 137.70 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 94 | 137.90 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 3 |
| 95 | 137.90 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 106 | 138.09 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 144 | 138.35 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 3 |
| 160 | 138.46 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 174 | 138.60 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 176 | 138.62 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 182 | 138.66 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 219 | 138.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 259 | 139.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 348 | 139.47 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 419 | 139.77 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 552 | 140.24 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 602 | 140.42 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 639 | 140.54 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 689 | 140.79 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 703 | 140.84 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 716 | 140.90 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 748 | 141.05 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 901 | 141.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |