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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0450500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.65 (0.0424) R2 : 0.00639
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.153 (0.0892) R2dN8 : 0.00826 R2N8 : 0.00639
σ : 0.798
deviance : 292.3
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
263.01 0.762 4.71 0.125 0.401 -0.588 0.294 5.21 0.177 22.4 1.276 208 -- --
278.81 0.784 4.65 0.312 0.406 0.34 0.0767 -- 0.174 0.371 1.092 407 -- --
263.37 0.756 4.71 0.112 0.4 -0.594 -- 5.23 0.176 22.4 1.282 208 -- --
278.83 0.783 4.65 0.309 0.407 0.343 -- -- 0.174 0.465 1.092 407 -- --
272.96 0.769 4.7 0.14 -- -0.488 -- 4.96 0.173 -- 1.3 208 -- --
282.1 0.787 4.65 0.281 0.357 -- 0.214 -- 0.182 23.2 -- -- -- --
282.25 0.787 4.65 0.271 0.356 -- -- -- 0.18 23.5 -- -- -- --
284.15 0.789 4.64 0.332 -- 0.737 -- -- 0.164 -- 0.6 65 -- --
281.32 0.785 4.66 -- 0.406 0.312 -- -- 0.14 0.428 1.092 407 -- --
290.22 0.796 4.64 0.281 -- -- -- -- 0.184 -- -- -- -- --
284.19 0.789 4.65 -- 0.359 -- -- -- 0.15 23.6 -- -- -- --
287.02 0.792 4.65 -- -- 0.683 -- -- 0.129 -- 0.6 65 -- --
292.3 0.798 4.65 -- -- -- -- -- 0.153 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 258.15 radiation 20 4320 > th dose independent rect. 16 16
2 260.54 radiation 20 4320 > th dose dependent rect. 16 16
5 263.32 wind 3 1440 < th dose dependent rect. 8 1
6 263.61 radiation 30 4320 < th dose independent rect. 15 17
8 263.78 wind 1 14400 > th dose independent rect. 1 1
9 263.83 wind 3 1440 < th dose independent rect. 8 1
11 264.08 radiation 30 4320 < th dose independent rect. 21 11
13 264.11 humidity 90 720 > th dose independent rect. 20 1
14 264.14 radiation 30 4320 < th dose independent rect. 4 4
16 264.18 radiation 30 4320 < th dose independent rect. 2 6
26 264.32 atmosphere 1005 270 < th dose independent rect. 22 8
27 264.33 wind 3 1440 > th dose independent rect. 8 1
29 264.35 radiation 10 720 < th dose independent rect. 15 15
30 264.51 wind 1 14400 < th dose independent rect. 1 1
32 264.61 humidity 80 720 > th dose dependent rect. 19 2
33 264.62 wind 1 270 < th dose independent rect. 5 23
35 264.72 wind 1 270 > th dose independent rect. 22 23
36 264.73 radiation 20 4320 > th dose independent rect. 6 2
50 264.76 radiation 20 4320 > th dose independent sin 11 NA
57 265.07 radiation 20 4320 > th dose dependent rect. 6 2
71 265.16 humidity 90 720 > th dose independent rect. 20 3
95 265.38 wind 3 270 < th dose dependent rect. 20 19
110 265.50 wind 1 270 > th dose independent no NA NA
135 265.66 wind 1 270 < th dose independent rect. 19 20
137 265.68 wind 1 270 < th dose independent rect. 8 23
148 265.77 humidity 90 720 > th dose independent rect. 20 5
151 265.79 wind 1 14400 < th dose dependent rect. 1 1
152 265.80 wind 1 270 < th dose independent rect. 10 21
153 265.81 atmosphere 1005 10 < th dose independent rect. 24 7
162 265.89 wind 1 1440 > th dose dependent rect. 8 1
166 265.92 wind 1 270 < th dose independent rect. 16 23
173 265.96 radiation 1 720 > th dose dependent rect. 15 15
178 265.98 atmosphere 1005 10 < th dose independent rect. 22 9
184 266.02 radiation 1 1440 > th dose dependent rect. 11 1
223 266.33 wind 3 270 < th dose dependent rect. 3 23
240 266.45 wind 1 270 > th dose independent rect. 13 23
242 266.47 radiation 1 720 > th dose dependent rect. 15 4
275 266.61 wind 3 270 < th dose dependent rect. 23 23
277 266.63 wind 1 270 < th dose independent rect. 13 23
278 266.63 wind 1 270 < th dose independent rect. 23 23
283 266.67 wind 1 270 < th dose independent no NA NA
291 266.68 radiation 40 1440 > th dose dependent rect. 11 1
295 266.72 atmosphere 995 43200 > th dose independent rect. 21 16
309 266.77 wind 1 270 < th dose independent rect. 19 12
316 266.80 humidity 90 14400 > th dose dependent rect. 6 1
319 266.81 atmosphere 995 43200 > th dose independent sin 7 NA
320 266.81 atmosphere 995 43200 < th dose independent rect. 18 18
324 266.82 wind 1 270 < th dose independent rect. 1 23
333 266.85 wind 3 1440 < th dose dependent rect. 6 6
334 266.86 atmosphere 995 43200 < th dose independent sin 7 NA
337 266.87 atmosphere 1010 10 < th dose dependent rect. 20 12
348 266.91 wind 3 270 < th dose dependent no NA NA
359 266.97 wind 3 270 < th dose dependent rect. 1 23
360 266.98 radiation 10 1440 < th dose independent rect. 11 7
367 267.00 wind 1 270 < th dose independent sin 9 NA
376 267.03 atmosphere 995 43200 < th dose independent rect. 21 15
382 267.04 wind 1 4320 < th dose dependent rect. 5 2
386 267.08 radiation 10 1440 < th dose independent rect. 13 4
388 267.08 wind 1 270 < th dose independent rect. 16 15
396 267.08 wind 3 270 < th dose dependent rect. 5 23
401 267.10 wind 3 270 < th dose dependent rect. 13 23
407 267.13 wind 3 270 < th dose dependent rect. 8 23
409 267.14 wind 1 720 > th dose independent rect. 8 17
435 267.22 atmosphere 995 43200 < th dose dependent sin 10 NA
447 267.26 atmosphere 995 43200 < th dose independent rect. 23 12
460 267.30 radiation 10 1440 < th dose independent rect. 11 14
462 267.30 radiation 10 1440 < th dose independent rect. 11 16
465 267.30 humidity 50 720 > th dose dependent rect. 18 11
469 267.32 radiation 10 1440 < th dose independent rect. 11 12
517 267.43 humidity 90 30 < th dose independent rect. 15 16
525 267.46 radiation 10 720 < th dose independent rect. 15 8
537 267.51 atmosphere 995 43200 > th dose independent rect. 3 6
538 267.51 atmosphere 995 43200 > th dose independent rect. 2 8
543 267.51 wind 1 270 < th dose independent rect. 13 18
545 267.52 atmosphere 995 43200 < th dose independent rect. 3 6
546 267.52 atmosphere 995 43200 < th dose independent rect. 1 9
547 267.52 atmosphere 995 43200 < th dose dependent rect. 24 9
549 267.52 atmosphere 995 43200 < th dose dependent rect. 11 19
556 267.54 wind 3 270 < th dose dependent rect. 10 23
558 267.55 atmosphere 995 43200 < th dose dependent rect. 17 16
579 267.61 atmosphere 995 43200 > th dose independent rect. 5 3
592 267.65 atmosphere 1005 90 < th dose dependent rect. 1 5
602 267.67 radiation 10 1440 < th dose independent rect. 13 12
655 267.78 wind 3 270 < th dose dependent sin 6 NA
672 267.85 atmosphere 995 43200 < th dose dependent rect. 4 4
682 267.89 atmosphere 1005 10 < th dose dependent rect. 1 6
693 267.93 radiation 40 1440 < th dose dependent rect. 11 1
704 267.97 wind 1 270 < th dose independent rect. 10 18
715 268.00 radiation 20 720 > th dose independent rect. 16 15
725 268.01 atmosphere 1005 10 > th dose dependent rect. 24 9
735 268.06 radiation 10 1440 < th dose independent sin 17 NA
739 268.09 wind 3 43200 > th dose independent rect. 19 1
746 268.11 atmosphere 1005 270 < th dose independent rect. 1 2
749 268.12 atmosphere 995 43200 < th dose independent rect. 4 4
769 268.15 wind 1 270 < th dose independent rect. 8 20
776 268.16 radiation 10 720 < th dose dependent rect. 14 16
798 268.24 radiation 20 1440 < th dose dependent rect. 11 1
831 268.32 atmosphere 1005 270 < th dose dependent rect. 1 2
852 268.35 radiation 30 720 > th dose independent rect. 15 17
863 268.38 wind 1 10 > th dose independent rect. 12 18
865 268.40 wind 3 720 > th dose independent rect. 7 13
867 268.41 wind 1 270 > th dose independent sin 5 NA
875 268.44 radiation 20 720 > th dose independent rect. 16 1
894 268.45 wind 3 43200 < th dose independent rect. 19 1
901 268.47 atmosphere 1010 10 < th dose independent rect. 20 19
961 268.59 wind 1 270 > th dose independent rect. 5 23
970 268.63 atmosphere 995 43200 < th dose dependent sin 16 NA
979 268.66 humidity 90 270 > th dose dependent sin 14 NA
996 268.72 wind 1 720 > th dose independent rect. 6 19