Os04g0449200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Xyloglucan fucosyltransferase family protein.
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Os04g0449200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Xyloglucan fucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 224.7 | 0.704 | 3.31 | 1.09 | 0.39 | -0.188 | 0.412 | 6.36 | 0.141 | 8.53 | 29.82 | 1719 | -- | -- |
| 227.86 | 0.703 | 3.44 | 0.0188 | 0.426 | 0.588 | 0.501 | -- | 0.085 | 8.2 | 31.4 | 3465 | -- | -- |
| 225.24 | 0.699 | 3.32 | 1.1 | 0.389 | -0.186 | -- | 6.3 | 0.141 | 8.5 | 29.83 | 1713 | -- | -- |
| 227.61 | 0.703 | 3.45 | 0.0228 | 0.405 | 0.541 | -- | -- | 0.036 | 8.28 | 29.89 | 3306 | -- | -- |
| 233.72 | 0.712 | 3.32 | 1.12 | -- | -0.209 | -- | 6.24 | 0.147 | -- | 29.84 | 1658 | -- | -- |
| 237.46 | 0.722 | 3.46 | 0.113 | 0.383 | -- | 0.338 | -- | -0.0225 | 8.3 | -- | -- | -- | -- |
| 237.82 | 0.722 | 3.46 | 0.123 | 0.383 | -- | -- | -- | -0.0227 | 8.26 | -- | -- | -- | -- |
| 236.48 | 0.716 | 3.46 | -0.0144 | -- | 0.539 | -- | -- | 0.0399 | -- | 29.8 | 3230 | -- | -- |
| 227.47 | 0.702 | 3.45 | -- | 0.41 | 0.595 | -- | -- | 0.0305 | 8.57 | 29.9 | 3404 | -- | -- |
| 245.91 | 0.733 | 3.47 | 0.125 | -- | -- | -- | -- | -0.0185 | -- | -- | -- | -- | -- |
| 238.21 | 0.722 | 3.47 | -- | 0.383 | -- | -- | -- | -0.0364 | 8.24 | -- | -- | -- | -- |
| 236.49 | 0.716 | 3.46 | -- | -- | 0.536 | -- | -- | 0.041 | -- | 29.85 | 3230 | -- | -- |
| 246.32 | 0.733 | 3.48 | -- | -- | -- | -- | -- | -0.0324 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 209.24 | wind | 9 | 30 | > th | dose dependent | rect. | 17 | 5 |
| 9 | 209.45 | wind | 9 | 10 | > th | dose dependent | rect. | 17 | 18 |
| 55 | 209.81 | wind | 9 | 30 | > th | dose dependent | rect. | 17 | 3 |
| 69 | 212.94 | wind | 9 | 10 | > th | dose dependent | sin | 11 | NA |
| 72 | 214.34 | wind | 9 | 10 | > th | dose independent | rect. | 17 | 1 |
| 73 | 214.34 | wind | 9 | 90 | > th | dose independent | rect. | 17 | 1 |
| 82 | 214.42 | humidity | 50 | 90 | < th | dose independent | rect. | 13 | 1 |
| 83 | 214.42 | humidity | 50 | 90 | < th | dose dependent | rect. | 13 | 1 |
| 86 | 214.47 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 12 | 1 |
| 93 | 214.57 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 106 | 214.63 | wind | 9 | 90 | > th | dose independent | rect. | 16 | 6 |
| 250 | 217.47 | wind | 9 | 90 | > th | dose independent | sin | 13 | NA |
| 396 | 219.96 | wind | 9 | 90 | < th | dose independent | sin | 13 | NA |
| 451 | 220.54 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 460 | 220.64 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 4 | 3 |
| 530 | 221.08 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 5 | 1 |
| 539 | 221.08 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 620 | 221.55 | humidity | 90 | 10 | < th | dose independent | rect. | 4 | 1 |
| 633 | 221.61 | wind | 9 | 10 | < th | dose independent | sin | 12 | NA |
| 697 | 221.98 | temperature | 30 | 14400 | > th | dose dependent | rect. | 18 | 15 |
| 700 | 222.04 | temperature | 30 | 270 | > th | dose independent | rect. | 10 | 1 |
| 723 | 222.21 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 4 | 18 |
| 742 | 222.35 | atmosphere | 1000 | 30 | < th | dose dependent | rect. | 5 | 10 |
| 744 | 222.38 | temperature | 30 | 30 | > th | dose dependent | rect. | 12 | 2 |
| 795 | 222.67 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 806 | 222.77 | temperature | 25 | 30 | > th | dose independent | rect. | 4 | 1 |
| 845 | 223.00 | temperature | 30 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 873 | 223.09 | temperature | 30 | 270 | > th | dose dependent | rect. | 10 | 1 |
| 885 | 223.12 | wind | 1 | 90 | < th | dose independent | rect. | 5 | 1 |
| 895 | 223.17 | temperature | 30 | 90 | > th | dose dependent | rect. | 18 | 20 |
| 914 | 223.28 | temperature | 25 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 926 | 223.30 | temperature | 30 | 270 | > th | dose dependent | rect. | 16 | 21 |
| 942 | 223.37 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 946 | 223.38 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 10 |
| 949 | 223.38 | temperature | 30 | 90 | > th | dose dependent | rect. | 10 | 4 |
| 968 | 223.44 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 972 | 223.45 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 2 |