Os04g0447600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NADPH-dependent codeinone reductase (EC 1.1.1.247).
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Os04g0447600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NADPH-dependent codeinone reductase (EC 1.1.1.247).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 251.98 | 0.746 | 4.98 | 0.328 | 3.07 | -0.161 | -1.09 | 14.2 | -0.211 | 8.72 | 31.5 | 3519 | -- | -- |
| 266.77 | 0.761 | 5.23 | -1.55 | 3.3 | 1.08 | -1.22 | -- | -0.257 | 8.68 | 32.2 | 5559 | -- | -- |
| 255.84 | 0.745 | 4.97 | 0.374 | 3.07 | -0.215 | -- | 14.6 | -0.21 | 8.73 | 31.4 | 3514 | -- | -- |
| 264.91 | 0.758 | 5.22 | -1.68 | 3.1 | 1.62 | -- | -- | -0.18 | 8.66 | 32.5 | 4004 | -- | -- |
| 778.28 | 1.3 | 4.99 | 1.04 | -- | -0.683 | -- | 15.4 | -0.19 | -- | 30.9 | 2918 | -- | -- |
| 331.81 | 0.854 | 5.28 | -1.33 | 3.04 | -- | -1.21 | -- | -0.45 | 8.59 | -- | -- | -- | -- |
| 336.59 | 0.859 | 5.28 | -1.36 | 3.04 | -- | -- | -- | -0.45 | 8.6 | -- | -- | -- | -- |
| 771.64 | 1.29 | 5.31 | -1.71 | -- | 1.27 | -- | -- | -0.26 | -- | 31.11 | 5799 | -- | -- |
| 339.12 | 0.858 | 5.21 | -- | 3.09 | 1.3 | -- | -- | -0.0822 | 8.72 | 32.58 | 3995 | -- | -- |
| 856.01 | 1.37 | 5.36 | -1.35 | -- | -- | -- | -- | -0.422 | -- | -- | -- | -- | -- |
| 385.65 | 0.919 | 5.24 | -- | 3.03 | -- | -- | -- | -0.298 | 8.63 | -- | -- | -- | -- |
| 847.29 | 1.36 | 5.28 | -- | -- | 1.13 | -- | -- | -0.103 | -- | 31.91 | 5828 | -- | -- |
| 904.41 | 1.4 | 5.32 | -- | -- | -- | -- | -- | -0.272 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 249.58 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 2 | 249.67 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 3 | 249.69 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 4 | 249.98 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 7 |
| 6 | 250.13 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 5 |
| 11 | 250.32 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 10 |
| 12 | 250.34 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 15 | 250.38 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 16 |
| 17 | 250.40 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 13 |
| 90 | 251.57 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 8 | 6 |
| 142 | 252.32 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 145 | 252.45 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 152 | 252.85 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 170 | 252.98 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 173 | 253.05 | temperature | 30.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 181 | 253.49 | temperature | 30.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 184 | 253.63 | temperature | 30.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 234 | 254.70 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 503 | 255.98 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 524 | 256.04 | temperature | 30.0 | 4320 | > th | dose dependent | no | NA | NA |
| 674 | 256.49 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 697 | 256.66 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 761 | 257.34 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 766 | 257.44 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 769 | 257.52 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 773 | 257.55 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 775 | 257.57 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 16 | 5 |
| 778 | 257.58 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 16 | 13 |
| 801 | 257.63 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 16 | 10 |