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Os04g0447500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
Description : Similar to NADPH-dependent codeinone reductase (EC 1.1.1.247).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
75.47 | 0.408 | 10.4 | -0.379 | 1.79 | 0.714 | -0.252 | 0.0253 | -0.303 | 19.8 | 7.195 | 10 | -- | -- |
75.47 | 0.405 | 10.4 | -0.379 | 1.79 | 0.713 | -0.262 | -- | -0.303 | 19.8 | 7.15 | 10 | -- | -- |
75.62 | 0.405 | 10.4 | -0.38 | 1.79 | 0.72 | -- | 0.14 | -0.304 | 19.8 | 7.28 | 10 | -- | -- |
75.66 | 0.405 | 10.4 | -0.373 | 1.79 | 0.724 | -- | -- | -0.304 | 19.8 | 7.167 | 10 | -- | -- |
155.91 | 0.582 | 10.4 | 0.234 | -- | 1.47 | -- | 1.42 | -0.346 | -- | 0.000131 | 817 | -- | -- |
83.47 | 0.428 | 10.4 | -0.37 | 1.69 | -- | -0.436 | -- | -0.305 | 19 | -- | -- | -- | -- |
83.96 | 0.429 | 10.4 | -0.362 | 1.69 | -- | -- | -- | -0.306 | 19.1 | -- | -- | -- | -- |
135.52 | 0.542 | 10.5 | -0.53 | -- | 1.68 | -- | -- | -0.525 | -- | 0.1643 | 798 | -- | -- |
79.29 | 0.415 | 10.4 | -- | 1.78 | 0.7 | -- | -- | -0.273 | 19.7 | 7.097 | 9 | -- | -- |
234.69 | 0.716 | 10.4 | -0.395 | -- | -- | -- | -- | -0.336 | -- | -- | -- | -- | -- |
87.41 | 0.437 | 10.4 | -- | 1.7 | -- | -- | -- | -0.266 | 19 | -- | -- | -- | -- |
141.03 | 0.553 | 10.4 | -- | -- | 1.63 | -- | -- | -0.455 | -- | -8.71 | 815 | -- | -- |
238.81 | 0.721 | 10.4 | -- | -- | -- | -- | -- | -0.293 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance![]() |
Histogram![]() ![]() |
Local optima within top1000 grid-points
rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|
1 | 61.21 | wind | 5.0 | 90 | < th | dose independent | rect. | 9 | 19 |
2 | 61.50 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 19 |
5 | 62.35 | wind | 5.0 | 270 | < th | dose independent | rect. | 6 | 21 |
8 | 62.55 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
13 | 63.19 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
16 | 63.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
17 | 63.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
20 | 63.76 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 3 |
21 | 63.77 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 3 |
23 | 63.79 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
25 | 63.79 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
26 | 63.79 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
29 | 63.79 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
31 | 63.79 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
34 | 63.79 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
37 | 63.94 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
39 | 63.95 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
41 | 63.99 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
46 | 64.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
48 | 64.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
53 | 64.35 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 5 |
71 | 64.86 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 5 |
74 | 64.93 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
77 | 64.97 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
79 | 65.01 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
80 | 65.02 | humidity | 60.0 | 90 | > th | dose independent | rect. | 4 | 5 |
88 | 65.11 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 5 |
90 | 65.11 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 5 |
91 | 65.13 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 5 |
92 | 65.13 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 5 |
95 | 65.13 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 5 |
96 | 65.13 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 5 |
97 | 65.13 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 19 |
100 | 65.18 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
110 | 65.28 | radiation | 1.0 | 30 | < th | dose dependent | sin | 11 | NA |
112 | 65.30 | wind | 7.0 | 10 | < th | dose independent | rect. | 5 | 4 |
114 | 65.30 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 4 |
116 | 65.30 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 4 |
117 | 65.30 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 4 |
119 | 65.30 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 4 |
120 | 65.30 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 4 |
121 | 65.30 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 20 |
136 | 65.32 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 4 |
139 | 65.32 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 4 |
141 | 65.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
142 | 65.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
144 | 65.38 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 4 |
149 | 65.42 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
155 | 65.52 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 5 |
156 | 65.53 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 5 |
163 | 65.57 | wind | 7.0 | 270 | < th | dose independent | rect. | 2 | 5 |
165 | 65.57 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
167 | 65.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
169 | 65.58 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
170 | 65.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
172 | 65.58 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
173 | 65.58 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 5 |
176 | 65.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 19 |
186 | 65.69 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 7 |
190 | 65.74 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
193 | 65.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 19 |
195 | 65.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 19 |
197 | 65.79 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 17 |
201 | 65.83 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 20 |
229 | 65.88 | wind | 9.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
236 | 65.93 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
240 | 65.95 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 19 |
263 | 66.01 | wind | 5.0 | 270 | < th | dose independent | rect. | 17 | 9 |
277 | 66.12 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 20 |
281 | 66.14 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
283 | 66.16 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 9 | 19 |
284 | 66.16 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 20 |
285 | 66.16 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
289 | 66.16 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 20 |
312 | 66.24 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 19 |
314 | 66.24 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
315 | 66.24 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 19 |
337 | 66.32 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 21 |
344 | 66.35 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 21 |
385 | 66.57 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 19 |
387 | 66.57 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 5 |
415 | 66.65 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
432 | 66.71 | radiation | 1.0 | 30 | < th | dose independent | sin | 11 | NA |
471 | 66.78 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
536 | 67.06 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 22 | 7 |
553 | 67.16 | radiation | 1.0 | 30 | > th | dose independent | sin | 11 | NA |
580 | 67.24 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
631 | 67.48 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
680 | 67.58 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
681 | 67.58 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 4 |
692 | 67.62 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 4 |
759 | 67.83 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 21 |
766 | 67.86 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
769 | 67.86 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
770 | 67.86 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
771 | 67.86 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
778 | 67.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 14 |
781 | 67.89 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 18 | 10 |
784 | 67.91 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 17 |
798 | 67.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 8 |
801 | 67.99 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 13 |
815 | 68.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
818 | 68.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
832 | 68.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 10 |
837 | 68.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 14 |
838 | 68.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 14 |
840 | 68.08 | radiation | 1.0 | 30 | > th | dose independent | rect. | 16 | 17 |
853 | 68.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 10 |
855 | 68.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 10 |
859 | 68.13 | radiation | 10.0 | 270 | < th | dose independent | rect. | 18 | 9 |
861 | 68.13 | wind | 9.0 | 90 | < th | dose dependent | rect. | 21 | 7 |
866 | 68.14 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 19 |
871 | 68.15 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 18 | 9 |
895 | 68.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 9 |
896 | 68.21 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 9 |
900 | 68.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 15 |
901 | 68.21 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 15 |
904 | 68.21 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 11 |
913 | 68.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 8 |
914 | 68.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
915 | 68.22 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 8 |
916 | 68.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 8 |
917 | 68.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 16 |
919 | 68.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 8 |
932 | 68.24 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 10 |
940 | 68.27 | radiation | 1.0 | 30 | > th | dose independent | rect. | 9 | 5 |
942 | 68.27 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 14 | 19 |
943 | 68.27 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 14 | 19 |
966 | 68.34 | radiation | 1.0 | 30 | > th | dose independent | rect. | 14 | 19 |
968 | 68.34 | humidity | 50.0 | 10 | > th | dose independent | rect. | 9 | 20 |
969 | 68.34 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 7 |
970 | 68.35 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 19 |
991 | 68.39 | wind | 5.0 | 90 | < th | dose independent | rect. | 21 | 7 |