Os04g0446600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0446600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.38 | 0.413 | 3.42 | 0.326 | 0.299 | 0.275 | -0.313 | 1.11 | -0.082 | 7.13 | 85 | 5447 | -- | -- |
| 78.96 | 0.414 | 3.4 | 0.192 | 0.303 | 0.253 | -0.371 | -- | -0.0945 | 6.78 | 86 | 7290 | -- | -- |
| 77.42 | 0.41 | 3.42 | 0.327 | 0.329 | 0.311 | -- | 1.16 | -0.0978 | 7.28 | 84.89 | 5158 | -- | -- |
| 79.28 | 0.415 | 3.41 | 0.195 | 0.303 | 0.277 | -- | -- | -0.0978 | 7.22 | 86.64 | 6948 | -- | -- |
| 82.18 | 0.422 | 3.43 | 0.324 | -- | 0.285 | -- | 1.07 | -0.0872 | -- | 84.65 | 5636 | -- | -- |
| 80.2 | 0.42 | 3.38 | 0.137 | 0.294 | -- | -0.365 | -- | 0.00615 | 6.88 | -- | -- | -- | -- |
| 80.54 | 0.42 | 3.38 | 0.131 | 0.292 | -- | -- | -- | 0.00725 | 7 | -- | -- | -- | -- |
| 83.78 | 0.426 | 3.41 | 0.189 | -- | 0.268 | -- | -- | -0.0958 | -- | 86.61 | 7016 | -- | -- |
| 80.11 | 0.417 | 3.4 | -- | 0.292 | 0.214 | -- | -- | -0.0996 | 6.95 | 87 | 7288 | -- | -- |
| 85.03 | 0.431 | 3.39 | 0.137 | -- | -- | -- | -- | 0.0126 | -- | -- | -- | -- | -- |
| 80.99 | 0.421 | 3.38 | -- | 0.294 | -- | -- | -- | -0.00733 | 6.97 | -- | -- | -- | -- |
| 84.66 | 0.429 | 3.41 | -- | -- | 0.211 | -- | -- | -0.094 | -- | 86.57 | 7209 | -- | -- |
| 85.52 | 0.432 | 3.39 | -- | -- | -- | -- | -- | -0.00255 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.29 | humidity | 80.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 3 | 67.74 | radiation | 10.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 6 | 67.91 | humidity | 80.0 | 10 | < th | dose independent | rect. | 23 | 9 |
| 12 | 69.26 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 36 | 70.27 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 40 | 72.00 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 60 | 73.85 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 62 | 73.96 | wind | 5.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 63 | 73.98 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 65 | 74.06 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 66 | 74.11 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 1 | 7 |
| 71 | 74.23 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 75 | 74.29 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 76 | 74.30 | wind | 7.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 77 | 74.32 | radiation | 20.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 81 | 74.37 | humidity | 80.0 | 10 | < th | dose independent | rect. | 20 | 12 |
| 97 | 74.58 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 100 | 74.59 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 102 | 74.59 | temperature | 30.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 103 | 74.59 | humidity | 50.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 105 | 74.59 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 106 | 74.59 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 108 | 74.59 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 109 | 74.59 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 112 | 74.64 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 126 | 74.69 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 1 |
| 127 | 74.69 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 133 | 74.74 | wind | 9.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 136 | 74.74 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 141 | 74.74 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 143 | 74.74 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 146 | 74.74 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 147 | 74.74 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 157 | 74.79 | radiation | 40.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 159 | 74.79 | wind | 9.0 | 30 | < th | dose independent | rect. | 8 | 23 |
| 160 | 74.79 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 165 | 74.91 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 23 |
| 166 | 74.91 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 195 | 75.31 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 201 | 75.37 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 203 | 75.41 | radiation | 10.0 | 10 | > th | dose independent | sin | 11 | NA |
| 215 | 75.46 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 2 | 7 |
| 225 | 75.52 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 226 | 75.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 229 | 75.52 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 233 | 75.52 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 242 | 75.52 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 243 | 75.52 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 263 | 75.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 279 | 75.58 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 287 | 75.62 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 292 | 75.63 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 293 | 75.63 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 295 | 75.63 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 296 | 75.63 | wind | 5.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 299 | 75.63 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 303 | 75.63 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 306 | 75.64 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 311 | 75.65 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 313 | 75.65 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 314 | 75.65 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 318 | 75.65 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 320 | 75.65 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 325 | 75.65 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 326 | 75.65 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 328 | 75.65 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 333 | 75.65 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 338 | 75.67 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 340 | 75.68 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 341 | 75.68 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 342 | 75.70 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 344 | 75.71 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 348 | 75.74 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 379 | 75.86 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 380 | 75.86 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 432 | 75.99 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 465 | 76.17 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 481 | 76.21 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 484 | 76.22 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 489 | 76.24 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 500 | 76.28 | wind | 7.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 530 | 76.36 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 532 | 76.36 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 534 | 76.37 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 535 | 76.37 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 546 | 76.41 | wind | 5.0 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 557 | 76.45 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 566 | 76.46 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 579 | 76.48 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 12 |
| 580 | 76.49 | wind | 5.0 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 581 | 76.50 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 8 | 23 |
| 598 | 76.54 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 606 | 76.56 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 608 | 76.57 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 628 | 76.61 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 645 | 76.65 | wind | 5.0 | 14400 | > th | dose independent | rect. | 8 | 9 |
| 647 | 76.65 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 8 | 23 |
| 668 | 76.67 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 724 | 76.72 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 728 | 76.73 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 750 | 76.77 | wind | 1.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 754 | 76.78 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 8 | 7 |
| 794 | 76.85 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 22 |
| 796 | 76.85 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 805 | 76.87 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 22 | 10 |
| 828 | 76.90 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 11 |
| 829 | 76.90 | wind | 9.0 | 720 | < th | dose independent | rect. | 15 | 17 |
| 844 | 76.92 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 11 |
| 846 | 76.93 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 852 | 76.95 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 20 |
| 870 | 76.99 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 894 | 77.02 | wind | 5.0 | 14400 | > th | dose independent | rect. | 23 | 18 |
| 925 | 77.04 | wind | 5.0 | 14400 | < th | dose independent | rect. | 23 | 18 |
| 950 | 77.07 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 955 | 77.08 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 6 |
| 988 | 77.12 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 10 | 20 |