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Os04g0445300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Pectinesterase inhibitor domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.04 (0.044) R2 : 0.782
β1 : -1.14 (0.16) R2dD : 0.0273 R2D : -0.00345
β2 : 3.62 (0.11) R2dC : 0.528 R2C : 0.493
β3 : 0.0246 (0.171) R2dE : -3.34e-05 R2E : -0.00729
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -7.6 (0.708) R2dD*E : 0.073 R2D*E : 0.0979
γ1 : -1.55 (0.0945) R2dN8 : 0.188 R2N8 : 0.139
σ : 0.79
deviance : 287.94
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_____
C
peak time of C : 6.91
E
wheather : wind
threshold : 6.484
memory length : 3741
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 17.1
open length of G : 3.95

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
278.09 0.784 7.05 -1.2 3.63 0.0356 1.98 -7.49 -1.56 6.95 6.63 3853 17.1 3.9
312.16 0.823 7.19 -0.937 3.83 1.26 2.14 -- -1.76 6.88 6.499 2516 16.5 2.82
287.94 0.79 7.04 -1.14 3.62 0.0246 -- -7.6 -1.55 6.91 6.484 3741 17.1 3.95
313.43 0.825 7.17 -0.703 3.68 1.63 -- -- -1.61 6.88 6.44 2613 16.4 2.23
966.83 1.45 7.14 -0.979 -- -0.0275 -- -7.63 -1.47 -- 5.934 3097 17.3 3.86
367.78 0.899 7.19 -1.36 3.66 -- 1.83 -- -1.78 6.87 -- -- -- --
376.29 0.908 7.19 -1.33 3.66 -- -- -- -1.79 6.82 -- -- -- --
768.74 1.29 7.38 -0.199 -- 6.19 -- -- -1.16 -- -1.804 2527 20.2 1.13
322.05 0.836 7.13 -- 3.64 1.92 -- -- -1.46 6.93 6.5 2640 16.4 2.07
1078.73 1.53 7.27 -1.25 -- -- -- -- -1.72 -- -- -- -- --
422.98 0.962 7.16 -- 3.65 -- -- -- -1.64 6.84 -- -- -- --
474.87 1.01 7.22 -- -- 4.72 -- -- -1.12 -- -4.869 2399 21.9 0.266
1119.98 1.56 7.23 -- -- -- -- -- -1.58 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 283.32 wind 9 4320 > th dose independent rect. 17 4
2 283.46 wind 7 4320 > th dose dependent rect. 17 4
4 283.96 wind 9 4320 > th dose independent rect. 17 7
7 284.20 wind 9 4320 < th dose independent rect. 17 4
11 285.73 wind 9 4320 < th dose independent rect. 17 8
13 285.91 wind 9 4320 < th dose independent rect. 17 10
57 291.88 humidity 90 14400 > th dose independent rect. 22 10
64 292.28 wind 7 4320 > th dose dependent rect. 17 1
71 292.57 humidity 90 14400 > th dose independent rect. 22 6
75 292.85 humidity 90 14400 < th dose independent rect. 24 8
86 293.69 wind 9 4320 > th dose independent rect. 17 1
103 294.12 humidity 90 14400 < th dose independent rect. 22 10
112 294.33 wind 9 4320 < th dose independent rect. 17 1
142 295.78 radiation 1 14400 < th dose dependent rect. 19 10
146 295.89 atmosphere 1005 14400 < th dose independent rect. 16 1
152 296.02 atmosphere 1005 14400 > th dose independent rect. 16 1
159 296.12 radiation 1 14400 < th dose dependent rect. 23 6
162 296.25 humidity 90 14400 < th dose independent rect. 22 4
260 299.63 humidity 90 14400 > th dose independent rect. 4 3
265 299.76 humidity 90 14400 > th dose independent sin 10 NA
282 300.24 humidity 90 14400 < th dose independent sin 10 NA
311 300.73 humidity 90 14400 > th dose independent rect. 5 1
322 300.98 humidity 90 14400 > th dose dependent rect. 23 9
335 301.40 humidity 90 14400 > th dose dependent rect. 24 1
339 301.48 humidity 80 14400 > th dose dependent rect. 22 2
403 302.56 humidity 90 14400 > th dose dependent rect. 3 5
412 302.74 wind 9 4320 > th dose independent rect. 16 18
416 302.89 atmosphere 1005 43200 < th dose independent rect. 16 8
419 302.91 wind 1 43200 > th dose dependent rect. 24 4
446 303.36 humidity 90 14400 > th dose dependent rect. 5 2
449 303.38 atmosphere 1005 14400 > th dose independent rect. 12 6
461 303.43 wind 5 43200 < th dose dependent rect. 1 3
464 303.45 wind 9 4320 > th dose independent sin 13 NA
497 303.94 atmosphere 1005 43200 > th dose independent rect. 19 1
532 304.35 humidity 90 14400 > th dose dependent sin 7 NA
559 304.51 wind 9 4320 > th dose dependent sin 14 NA
596 304.82 wind 9 4320 > th dose dependent rect. 15 19
600 304.87 atmosphere 1005 43200 > th dose independent rect. 16 7
624 305.10 humidity 80 43200 > th dose dependent rect. 12 3
639 305.21 wind 9 43200 > th dose independent rect. 15 1
668 305.44 humidity 50 720 > th dose dependent rect. 17 16
692 305.59 atmosphere 1005 43200 < th dose independent sin 17 NA
696 305.60 radiation 1 14400 < th dose independent rect. 18 11
703 305.65 humidity 80 43200 > th dose dependent rect. 12 5
737 305.98 atmosphere 1005 43200 > th dose independent rect. 15 11
742 306.00 atmosphere 1005 43200 > th dose independent rect. 15 13
745 306.02 wind 1 43200 > th dose independent rect. 18 12
780 306.23 wind 9 4320 < th dose independent sin 14 NA
788 306.25 atmosphere 1005 43200 > th dose independent rect. 11 12
801 306.32 atmosphere 1005 14400 > th dose independent rect. 12 1
808 306.36 wind 9 4320 < th dose independent rect. 16 18
816 306.39 atmosphere 1005 43200 > th dose independent sin 17 NA
822 306.41 atmosphere 1005 14400 < th dose independent rect. 12 1
836 306.46 wind 1 43200 < th dose independent rect. 18 12
942 306.98 radiation 40 1440 > th dose dependent rect. 14 19
946 307.02 wind 1 43200 < th dose independent rect. 22 7
949 307.02 humidity 90 720 < th dose dependent rect. 17 15