Os04g0444600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 26S proteasome subunit RPN6a (Fragment).
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Os04g0444600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 26S proteasome subunit RPN6a (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.78 | 0.187 | 12.8 | 1.35 | 0.406 | -0.607 | -0.255 | 0.648 | 0.389 | 19.3 | 9.966 | 1311 | -- | -- |
| 16.51 | 0.189 | 12.8 | 1.29 | 0.407 | -0.584 | -0.303 | -- | 0.362 | 19.1 | 11.95 | 5629 | -- | -- |
| 15.95 | 0.186 | 12.8 | 1.36 | 0.404 | -0.608 | -- | 0.66 | 0.39 | 19.3 | 9.331 | 1320 | -- | -- |
| 16.6 | 0.19 | 12.8 | 1.33 | 0.42 | -0.59 | -- | -- | 0.402 | 19 | 7.648 | 7523 | -- | -- |
| 24.55 | 0.231 | 12.8 | 1.35 | -- | -0.62 | -- | 0.61 | 0.381 | -- | 11.12 | 1378 | -- | -- |
| 22.1 | 0.22 | 12.8 | 1.02 | 0.42 | -- | -0.3 | -- | 0.244 | 18.8 | -- | -- | -- | -- |
| 22.33 | 0.221 | 12.8 | 1.03 | 0.419 | -- | -- | -- | 0.243 | 18.9 | -- | -- | -- | -- |
| 24.89 | 0.232 | 12.8 | 1.22 | -- | -0.62 | -- | -- | 0.349 | -- | 10.97 | 1379 | -- | -- |
| 37.82 | 0.286 | 12.9 | -- | 0.399 | 0.585 | -- | -- | -0.0248 | 19.4 | -37.98 | 47520 | -- | -- |
| 31.52 | 0.262 | 12.8 | 1.02 | -- | -- | -- | -- | 0.235 | -- | -- | -- | -- | -- |
| 50.22 | 0.331 | 12.9 | -- | 0.407 | -- | -- | -- | 0.128 | 19 | -- | -- | -- | -- |
| 46.53 | 0.318 | 12.9 | -- | -- | 0.566 | -- | -- | -0.0477 | -- | -30.9 | 47520 | -- | -- |
| 58.94 | 0.358 | 12.9 | -- | -- | -- | -- | -- | 0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.94 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 2 | 14.96 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 3 | 15.01 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 5 | 15.03 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 9 | 15.04 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 13 | 15.07 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 17 | 15.11 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 20 | 15.18 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 8 |
| 24 | 15.21 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 25 | 15.22 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 30 | 15.24 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 9 |
| 32 | 15.25 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 33 | 15.25 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 42 | 15.31 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 43 | 15.31 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 53 | 15.35 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 68 | 15.37 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 109 | 15.41 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 111 | 15.41 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 123 | 15.42 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 125 | 15.42 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 21 | NA |
| 134 | 15.43 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 155 | 15.44 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 167 | 15.45 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 188 | 15.46 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 207 | 15.47 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 316 | 15.54 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 398 | 15.59 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 442 | 15.62 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 506 | 15.64 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 23 |
| 520 | 15.65 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 13 |
| 522 | 15.65 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 17 |
| 661 | 15.71 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 694 | 15.73 | wind | 9.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 695 | 15.73 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 775 | 15.76 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 789 | 15.77 | wind | 9.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 817 | 15.78 | wind | 9.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 864 | 15.79 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 912 | 15.81 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 972 | 15.83 | temperature | 10.0 | 1440 | > th | dose dependent | no | NA | NA |