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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0444400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Mlo-related protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.08 (0.0423) R2 : 0.108
β1 : 0.484 (0.155) R2dD : 0.0197 R2D : 0.0147
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.08 (0.567) R2dE : 0.0265 R2E : 0.0275
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -10.6 (1.87) R2dD*E : 0.0629 R2D*E : 0.0632
γ1 : 0.0637 (0.0904) R2dN8 : 0.0013 R2N8 : -0.00105
σ : 0.792
deviance : 288.84
__
_____
C
peak time of C : --
E
wheather : humidity
threshold : 91.37
memory length : 117
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.12
open length of G : 0.933

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
283.33 0.791 3.07 0.457 0.239 2.1 0.826 -10.8 0.0637 8.99 91.07 114 2.1 0.95
303.62 0.812 3.08 0.403 0.231 2.26 0.816 -- 0.0541 9.66 91.52 119 2.02 0.953
285.59 0.787 3.08 0.482 0.241 2.03 -- -10.6 0.0615 8.48 91.32 117 2.12 0.923
305.6 0.814 3.08 0.457 0.244 2.14 -- -- 0.049 8.34 91.23 128 2.02 0.91
288.84 0.792 3.08 0.484 -- 2.08 -- -10.6 0.0637 -- 91.37 117 2.12 0.933
313.15 0.83 3.08 0.417 0.248 -- 0.75 -- 0.0464 9.07 -- -- -- --
314.3 0.83 3.08 0.438 0.284 -- -- -- 0.0438 7.4 -- -- -- --
308.93 0.819 3.08 0.468 -- 2.18 -- -- 0.0547 -- 91.58 119 2.03 0.95
309.61 0.82 3.09 -- 0.249 2.26 -- -- -0.00448 8.15 90.58 121 2.28 0.0166
318.58 0.834 3.09 0.443 -- -- -- -- 0.0484 -- -- -- -- --
319.36 0.836 3.09 -- 0.288 -- -- -- -0.005 7.3 -- -- -- --
312.99 0.824 3.1 -- -- 2.32 -- -- -0.00386 -- 90.76 122 2.27 0.0162
323.76 0.84 3.1 -- -- -- -- -- -0.000717 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 284.60 humidity 90.0 90 < th dose dependent rect. 2 1
2 284.76 radiation 10.0 10 < th dose independent rect. 9 3
5 285.50 humidity 90.0 90 < th dose independent rect. 2 2
7 285.65 wind 7.0 90 > th dose independent rect. 2 7
8 286.02 wind 7.0 90 > th dose dependent rect. 2 7
9 286.40 radiation 10.0 10 < th dose dependent rect. 9 4
30 288.59 atmosphere 1005.0 10 > th dose dependent rect. 3 1
32 289.25 wind 7.0 90 > th dose independent rect. 7 2
35 289.29 wind 7.0 90 > th dose dependent rect. 7 2
46 291.22 atmosphere 1000.0 90 < th dose independent rect. 4 1
50 291.22 atmosphere 1000.0 90 < th dose dependent rect. 4 1
58 291.23 atmosphere 1000.0 10 < th dose dependent rect. 5 1
68 291.31 atmosphere 1005.0 10 > th dose independent rect. 3 1
102 292.94 temperature 25.0 90 > th dose independent rect. 5 1
124 293.38 temperature 25.0 90 > th dose dependent rect. 5 1
127 293.39 radiation 40.0 10 < th dose independent rect. 5 7
148 294.12 wind 1.0 10 > th dose dependent rect. 3 1
159 294.52 radiation 10.0 90 < th dose independent rect. 5 7
161 294.62 wind 1.0 90 > th dose dependent rect. 2 2
168 295.11 wind 1.0 10 < th dose dependent rect. 5 4
176 295.53 radiation 40.0 10 < th dose independent rect. 19 17
177 295.54 radiation 10.0 10 < th dose independent rect. 6 7
185 295.89 radiation 40.0 10 < th dose dependent rect. 6 7
218 296.75 wind 1.0 10 > th dose independent rect. 3 1
268 297.77 radiation 40.0 30 < th dose independent rect. 5 22
279 297.84 radiation 10.0 90 < th dose independent rect. 5 21
282 297.88 radiation 10.0 10 < th dose independent rect. 9 17
290 297.95 radiation 40.0 90 < th dose independent rect. 5 16
316 298.31 radiation 40.0 90 < th dose independent rect. 5 18
327 298.48 radiation 40.0 10 < th dose dependent rect. 19 18
330 298.51 temperature 25.0 10 < th dose dependent rect. 4 1
353 298.80 wind 1.0 10 < th dose dependent rect. 8 2
358 298.84 radiation 20.0 270 > th dose dependent rect. 6 1
383 298.95 radiation 40.0 10 < th dose dependent rect. 5 22
404 299.15 temperature 25.0 10 < th dose independent rect. 4 1
416 299.26 radiation 10.0 90 < th dose independent rect. 18 18
421 299.31 wind 5.0 90 > th dose dependent rect. 18 16
426 299.37 temperature 25.0 90 < th dose independent rect. 3 1
433 299.45 wind 1.0 30 < th dose independent rect. 8 3
447 299.57 radiation 20.0 270 > th dose independent rect. 6 1
481 299.72 atmosphere 1000.0 10 > th dose independent rect. 21 9
489 299.78 wind 9.0 1440 < th dose independent rect. 4 1
490 299.78 temperature 10.0 1440 > th dose independent rect. 4 1
493 299.78 temperature 30.0 1440 < th dose independent rect. 4 1
497 299.78 humidity 50.0 1440 > th dose independent rect. 4 1
506 299.78 atmosphere 995.0 1440 > th dose independent rect. 4 1
507 299.78 atmosphere 1015.0 1440 < th dose independent rect. 4 1
508 299.78 radiation 20.0 1440 < th dose independent rect. 4 1
520 299.78 temperature 10.0 1440 > th dose independent rect. 5 23
524 299.79 atmosphere 1000.0 270 > th dose independent rect. 23 5
541 299.90 wind 9.0 1440 < th dose independent rect. 22 8
566 300.11 atmosphere 1000.0 270 > th dose independent rect. 21 8
583 300.21 temperature 20.0 90 > th dose independent rect. 5 6
588 300.23 wind 5.0 90 > th dose independent rect. 18 16
590 300.25 wind 9.0 90 < th dose independent rect. 3 1
591 300.25 temperature 10.0 90 > th dose independent rect. 3 1
594 300.25 humidity 50.0 90 > th dose independent rect. 3 1
598 300.25 atmosphere 1010.0 90 < th dose independent rect. 3 1
600 300.25 radiation 1.0 90 < th dose independent rect. 3 1
607 300.25 temperature 10.0 90 > th dose independent rect. 4 23
608 300.25 radiation 1.0 90 < th dose dependent rect. 3 1
624 300.30 atmosphere 995.0 270 > th dose dependent rect. 23 5
627 300.31 wind 1.0 10 < th dose independent rect. 6 4
630 300.32 temperature 10.0 1440 > th dose independent rect. 22 8
633 300.32 temperature 30.0 1440 < th dose independent rect. 22 8
637 300.32 humidity 50.0 1440 > th dose independent rect. 22 8
644 300.32 atmosphere 995.0 1440 > th dose independent rect. 22 8
645 300.32 radiation 20.0 1440 < th dose independent rect. 22 8
654 300.32 temperature 10.0 1440 > th dose independent rect. 6 16
657 300.33 temperature 30.0 90 < th dose independent rect. 5 6
690 300.38 atmosphere 995.0 30 > th dose independent rect. 4 23
734 300.42 precipitation 0.1 90 < th dose independent rect. 3 1
735 300.42 precipitation 0.1 90 < th dose dependent rect. 3 1
747 300.46 precipitation 0.1 10 < th dose independent rect. 4 23
748 300.46 precipitation 0.1 10 < th dose dependent rect. 4 23
793 300.53 humidity 50.0 30 > th dose independent rect. 4 23
796 300.53 wind 7.0 10 > th dose dependent rect. 19 15
836 300.60 humidity 80.0 90 > th dose independent rect. 5 5
883 300.65 wind 9.0 30 < th dose independent rect. 4 23
936 300.78 wind 7.0 10 > th dose dependent rect. 19 10
945 300.80 wind 9.0 90 < th dose independent rect. 5 16
948 300.82 temperature 15.0 90 > th dose independent rect. 5 16
959 300.88 wind 7.0 90 < th dose independent rect. 21 8
968 300.90 radiation 10.0 10 < th dose independent rect. 9 15
973 300.91 radiation 1.0 90 < th dose independent rect. 21 8
995 300.92 temperature 10.0 90 > th dose independent rect. 21 8
996 300.92 temperature 30.0 90 < th dose independent rect. 21 8
997 300.92 humidity 50.0 90 > th dose independent rect. 21 8