Os04g0444200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Calmodulin-binding protein 60-B (Fragment).
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Os04g0444200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Calmodulin-binding protein 60-B (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.27 | 0.19 | 11.4 | 0.457 | 0.806 | 0.407 | -0.186 | -0.218 | 0.395 | 6.94 | 66.99 | 25 | -- | -- |
| 16.44 | 0.189 | 11.4 | 0.449 | 0.808 | 0.397 | -0.195 | -- | 0.391 | 6.9 | 66.66 | 24 | -- | -- |
| 16.36 | 0.188 | 11.4 | 0.454 | 0.806 | 0.402 | -- | -0.224 | 0.395 | 6.92 | 67.22 | 24 | -- | -- |
| 16.54 | 0.189 | 11.4 | 0.446 | 0.808 | 0.394 | -- | -- | 0.392 | 6.91 | 67 | 24 | -- | -- |
| 28.63 | 0.249 | 11.4 | 0.507 | -- | 1.12 | -- | -0.987 | 0.405 | -- | 58.39 | 384 | -- | -- |
| 20.04 | 0.21 | 11.4 | 0.445 | 0.982 | -- | -0.124 | -- | 0.357 | 5.8 | -- | -- | -- | -- |
| 20.07 | 0.21 | 11.4 | 0.444 | 0.981 | -- | -- | -- | 0.358 | 5.8 | -- | -- | -- | -- |
| 29.08 | 0.251 | 11.4 | 0.423 | -- | 0.992 | -- | -- | 0.452 | -- | 67.7 | 380 | -- | -- |
| 21.73 | 0.217 | 11.4 | -- | 0.792 | 0.386 | -- | -- | 0.34 | 6.79 | 69 | 68 | -- | -- |
| 69.98 | 0.391 | 11.4 | 0.475 | -- | -- | -- | -- | 0.381 | -- | -- | -- | -- | -- |
| 25.28 | 0.235 | 11.4 | -- | 0.988 | -- | -- | -- | 0.308 | 5.77 | -- | -- | -- | -- |
| 33.69 | 0.27 | 11.4 | -- | -- | 0.992 | -- | -- | 0.415 | -- | 69.51 | 372 | -- | -- |
| 75.92 | 0.407 | 11.4 | -- | -- | -- | -- | -- | 0.328 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.42 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 4 | 19 |
| 5 | 15.88 | humidity | 80.0 | 30 | > th | dose independent | rect. | 4 | 19 |
| 6 | 15.88 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 22 | 16.15 | humidity | 70.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 25 | 16.17 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 37 | 16.23 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 53 | 16.28 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 17 | 22 |
| 67 | 16.34 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 4 | 15 |
| 68 | 16.34 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 69 | 16.34 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 72 | 16.36 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 78 | 16.38 | humidity | 70.0 | 30 | > th | dose dependent | no | NA | NA |
| 81 | 16.38 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 97 | 16.42 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 7 | 23 |
| 165 | 16.56 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 166 | 16.57 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 21 |
| 181 | 16.59 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 18 |
| 182 | 16.59 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 23 |
| 186 | 16.59 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 18 |
| 278 | 16.70 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 12 |
| 351 | 16.79 | humidity | 80.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 360 | 16.80 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 13 |
| 404 | 16.83 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 10 | 13 |
| 491 | 16.91 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 23 | 21 |
| 500 | 16.93 | humidity | 80.0 | 30 | > th | dose independent | rect. | 4 | 12 |
| 555 | 16.97 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 1 | 13 |
| 563 | 16.98 | humidity | 80.0 | 30 | > th | dose independent | rect. | 4 | 10 |
| 585 | 17.00 | humidity | 80.0 | 30 | > th | dose independent | sin | 23 | NA |
| 589 | 17.00 | humidity | 80.0 | 30 | < th | dose independent | rect. | 22 | 22 |
| 598 | 17.00 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 1 | 19 |
| 604 | 17.01 | humidity | 80.0 | 30 | < th | dose independent | rect. | 15 | 23 |
| 606 | 17.01 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 11 | 1 |
| 624 | 17.02 | humidity | 80.0 | 30 | < th | dose independent | rect. | 19 | 23 |
| 646 | 17.03 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 19 |
| 670 | 17.04 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 679 | 17.05 | humidity | 80.0 | 30 | < th | dose independent | rect. | 3 | 17 |
| 696 | 17.06 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 13 |
| 706 | 17.07 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 23 |
| 707 | 17.07 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 12 | 23 |
| 719 | 17.07 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 12 | 23 |
| 737 | 17.08 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 741 | 17.09 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 19 |
| 757 | 17.09 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 19 |
| 785 | 17.11 | humidity | 80.0 | 30 | < th | dose independent | sin | 23 | NA |
| 786 | 17.11 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 21 | 14 |
| 795 | 17.11 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 21 | 14 |
| 811 | 17.12 | humidity | 80.0 | 30 | < th | dose independent | rect. | 5 | 15 |
| 849 | 17.14 | humidity | 80.0 | 30 | < th | dose independent | no | NA | NA |
| 850 | 17.14 | humidity | 80.0 | 30 | < th | dose independent | rect. | 7 | 13 |
| 855 | 17.14 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 21 |
| 856 | 17.14 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 857 | 17.14 | humidity | 80.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 858 | 17.14 | humidity | 80.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 859 | 17.14 | humidity | 80.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 898 | 17.16 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 10 |
| 899 | 17.16 | humidity | 80.0 | 10 | > th | dose independent | rect. | 8 | 15 |
| 901 | 17.16 | humidity | 80.0 | 30 | < th | dose independent | rect. | 7 | 21 |
| 908 | 17.16 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 10 |
| 922 | 17.17 | humidity | 80.0 | 30 | < th | dose independent | rect. | 3 | 21 |
| 949 | 17.18 | humidity | 80.0 | 10 | > th | dose independent | rect. | 10 | 13 |
| 955 | 17.18 | radiation | 1.0 | 720 | < th | dose independent | rect. | 3 | 18 |
| 960 | 17.18 | humidity | 80.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 974 | 17.19 | humidity | 80.0 | 30 | > th | dose independent | no | NA | NA |
| 988 | 17.19 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 5 | 22 |
| 989 | 17.19 | humidity | 80.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 990 | 17.19 | humidity | 80.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 991 | 17.19 | humidity | 80.0 | 30 | > th | dose independent | rect. | 15 | 23 |
| 992 | 17.19 | humidity | 80.0 | 30 | > th | dose independent | rect. | 17 | 23 |
| 993 | 17.19 | humidity | 80.0 | 30 | > th | dose independent | rect. | 19 | 23 |