Os04g0440300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os04g0440300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.08 | 0.525 | 4.71 | 0.199 | 0.926 | 1.48 | 1.15 | 0.947 | 0.191 | 1.43 | 21.7 | 2112 | -- | -- |
| 127.09 | 0.525 | 4.74 | -0.0928 | 0.893 | 1.43 | 1.22 | -- | 0.135 | 1.33 | 21.8 | 2219 | -- | -- |
| 130.34 | 0.532 | 4.71 | 0.199 | 0.919 | 1.49 | -- | 1.09 | 0.191 | 1.56 | 21.7 | 2151 | -- | -- |
| 132.97 | 0.537 | 4.75 | -0.131 | 0.909 | 1.44 | -- | -- | 0.113 | 1.56 | 21.73 | 2205 | -- | -- |
| 177.98 | 0.621 | 4.71 | 0.134 | -- | 1.66 | -- | 1.13 | 0.156 | -- | 21.75 | 2417 | -- | -- |
| 191.2 | 0.648 | 4.64 | 0.589 | 1 | -- | 1.17 | -- | 0.581 | 1.12 | -- | -- | -- | -- |
| 196.8 | 0.657 | 4.65 | 0.546 | 1 | -- | -- | -- | 0.574 | 1.29 | -- | -- | -- | -- |
| 180.76 | 0.626 | 4.78 | -0.142 | -- | 1.57 | -- | -- | 0.0279 | -- | 22.1 | 2433 | -- | -- |
| 133.29 | 0.538 | 4.74 | -- | 0.931 | 1.4 | -- | -- | 0.139 | 1.57 | 21.76 | 2114 | -- | -- |
| 258.95 | 0.752 | 4.63 | 0.585 | -- | -- | -- | -- | 0.595 | -- | -- | -- | -- | -- |
| 204.66 | 0.669 | 4.66 | -- | 1.01 | -- | -- | -- | 0.513 | 1.31 | -- | -- | -- | -- |
| 179.85 | 0.625 | 4.75 | -- | -- | 1.48 | -- | -- | 0.0706 | -- | 22.28 | 2383 | -- | -- |
| 267.98 | 0.764 | 4.65 | -- | -- | -- | -- | -- | 0.53 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 127.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 14 |
| 2 | 127.51 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 5 | 127.55 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 9 | 127.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 11 | 127.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 19 |
| 115 | 128.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 118 | 128.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 137 | 129.11 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 153 | 129.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 154 | 129.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 184 | 129.41 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 21 |
| 235 | 129.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 276 | 130.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 282 | 130.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 352 | 131.82 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 354 | 131.85 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 356 | 131.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 365 | 132.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 387 | 132.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 438 | 132.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 444 | 132.79 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 653 | 134.14 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 657 | 134.16 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 675 | 134.31 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 755 | 134.90 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 11 |
| 786 | 135.12 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 11 |
| 852 | 135.65 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 876 | 135.79 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 930 | 136.13 | temperature | 20 | 1440 | > th | dose independent | sin | 5 | NA |
| 996 | 136.49 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 19 |