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Os04g0439200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : T-complex 11 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0275) R2 : 0.639
β1 : 1.11 (0.101) R2dD : 0.0996 R2D : 0.0332
β2 : 1.72 (0.0712) R2dC : 0.466 R2C : 0.458
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.62 (0.0586) R2dN8 : 0.119 R2N8 : 0.0653
σ : 0.516
deviance : 121.55
__
_____
C
peak time of C : 4.99
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
112.1 0.497 11.1 1.08 1.53 0.838 0.137 -0.204 0.676 5.43 38.95 237 -- --
112.1 0.493 11.1 1.08 1.52 0.841 0.12 -- 0.677 5.42 38.04 235 -- --
112.04 0.493 11.1 1.08 1.54 0.839 -- 0.0447 0.678 5.42 36.93 223 -- --
111.98 0.493 11.1 1.1 1.53 0.824 -- -- 0.681 5.45 36.92 224 -- --
158.23 0.586 11.1 1.29 -- 1.88 -- -0.693 0.884 -- 19.56 507 -- --
121.48 0.517 11.1 1.11 1.73 -- -0.171 -- 0.619 4.97 -- -- -- --
121.55 0.516 11.1 1.11 1.72 -- -- -- 0.62 4.99 -- -- -- --
131.81 0.535 11.1 1.2 -- 1.76 -- -- 0.86 -- 3.05 557 -- --
142.71 0.556 11.1 -- 1.58 0.86 -- -- 0.548 5.38 39.81 201 -- --
277.96 0.779 11.1 1.17 -- -- -- -- 0.664 -- -- -- -- --
153.9 0.58 11.2 -- 1.74 -- -- -- 0.497 4.97 -- -- -- --
165.79 0.6 11.1 -- -- 1.81 -- -- 0.662 -- 4.848 581 -- --
314.1 0.827 11.2 -- -- -- -- -- 0.534 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 98.36 temperature 20.0 270 > th dose independent rect. 3 7
4 99.83 temperature 15.0 270 > th dose dependent rect. 3 6
7 100.87 temperature 10.0 270 > th dose dependent rect. 2 8
18 102.57 atmosphere 1000.0 270 > th dose independent rect. 14 8
19 102.89 radiation 30.0 270 < th dose independent rect. 3 8
22 103.34 humidity 50.0 270 > th dose independent rect. 9 8
23 103.34 wind 1.0 270 > th dose independent rect. 14 9
27 103.48 humidity 50.0 270 > th dose independent rect. 11 16
30 103.60 humidity 50.0 270 > th dose independent rect. 23 15
31 103.62 radiation 30.0 270 < th dose independent rect. 16 17
34 103.66 precipitation 0.1 270 < th dose independent rect. 14 9
35 103.66 precipitation 0.1 270 < th dose dependent rect. 14 9
38 103.76 temperature 15.0 10 > th dose dependent rect. 5 7
46 104.01 temperature 10.0 270 > th dose dependent rect. 16 17
47 104.03 precipitation 0.1 270 < th dose independent rect. 15 18
48 104.03 precipitation 0.1 270 < th dose dependent rect. 15 18
49 104.05 temperature 10.0 270 > th dose independent rect. 14 9
51 104.05 temperature 10.0 270 > th dose independent rect. 23 15
52 104.05 atmosphere 995.0 270 > th dose independent rect. 23 15
56 104.20 wind 9.0 270 < th dose independent rect. 23 15
60 104.25 atmosphere 995.0 270 > th dose independent rect. 15 18
66 104.41 temperature 20.0 270 > th dose independent rect. 4 17
89 104.71 wind 9.0 270 < th dose independent rect. 9 6
91 104.75 temperature 10.0 270 > th dose independent rect. 9 6
92 104.75 atmosphere 1015.0 270 < th dose independent rect. 9 6
93 104.75 temperature 10.0 270 > th dose independent rect. 15 18
94 104.77 precipitation 0.1 270 < th dose independent rect. 23 15
95 104.77 radiation 40.0 270 < th dose dependent rect. 3 8
96 104.77 precipitation 0.1 270 < th dose dependent rect. 23 15
97 104.78 wind 9.0 270 < th dose independent rect. 14 9
99 104.81 precipitation 0.1 270 < th dose independent rect. 9 6
100 104.81 atmosphere 995.0 270 > th dose dependent rect. 9 6
101 104.81 precipitation 0.1 270 < th dose dependent rect. 9 6
105 104.84 atmosphere 1015.0 270 < th dose independent rect. 23 15
108 104.87 wind 1.0 270 > th dose independent rect. 15 18
109 104.88 temperature 20.0 10 > th dose independent rect. 5 7
113 104.96 wind 9.0 270 < th dose independent rect. 15 18
114 104.99 atmosphere 1000.0 270 > th dose independent rect. 4 17
116 105.03 wind 1.0 270 > th dose independent rect. 9 6
120 105.08 radiation 40.0 270 < th dose dependent rect. 15 18
122 105.09 radiation 40.0 270 < th dose independent rect. 14 9
129 105.21 atmosphere 995.0 270 > th dose independent rect. 9 6
135 105.24 temperature 30.0 270 < th dose independent rect. 3 7
137 105.26 temperature 30.0 270 < th dose independent rect. 2 9
144 105.34 humidity 50.0 270 > th dose dependent rect. 3 8
145 105.35 atmosphere 1015.0 270 < th dose independent rect. 14 8
158 105.46 atmosphere 1005.0 270 > th dose independent rect. 11 2
159 105.47 humidity 50.0 90 > th dose independent rect. 11 6
161 105.49 atmosphere 1000.0 270 > th dose dependent rect. 11 2
180 105.65 atmosphere 1005.0 270 > th dose independent rect. 9 5
182 105.66 atmosphere 1005.0 90 > th dose independent rect. 11 6
194 105.75 wind 7.0 270 < th dose independent rect. 2 9
198 105.78 precipitation 0.1 270 < th dose independent rect. 2 9
199 105.78 precipitation 0.1 270 < th dose dependent rect. 2 9
218 105.92 precipitation 0.1 270 < th dose independent rect. 3 7
220 105.92 precipitation 0.1 270 < th dose dependent rect. 3 7
226 105.97 humidity 50.0 30 > th dose independent rect. 1 16
232 106.01 wind 9.0 270 < th dose independent rect. 11 15
239 106.06 wind 9.0 270 < th dose independent rect. 10 17
272 106.21 wind 7.0 270 < th dose independent rect. 3 7
296 106.32 atmosphere 995.0 270 > th dose independent rect. 3 7
297 106.32 atmosphere 1015.0 270 < th dose independent rect. 3 7
298 106.32 temperature 10.0 270 > th dose independent rect. 10 17
299 106.32 radiation 1.0 90 < th dose dependent sin 9 NA
300 106.33 humidity 50.0 10 > th dose independent rect. 12 17
303 106.36 atmosphere 995.0 270 > th dose independent rect. 2 9
304 106.36 atmosphere 1015.0 270 < th dose independent rect. 2 9
305 106.36 temperature 10.0 270 > th dose independent rect. 11 15
312 106.39 humidity 80.0 270 > th dose independent rect. 3 7
315 106.40 radiation 40.0 270 < th dose independent rect. 3 19
329 106.46 humidity 50.0 270 > th dose independent rect. 3 7
333 106.47 radiation 40.0 270 < th dose independent rect. 4 17
351 106.57 radiation 1.0 270 > th dose independent rect. 9 6
371 106.63 radiation 1.0 90 > th dose independent sin 8 NA
376 106.65 radiation 1.0 90 < th dose independent sin 9 NA
392 106.76 precipitation 0.1 270 < th dose independent rect. 13 22
394 106.76 precipitation 0.1 270 < th dose dependent rect. 13 22
401 106.78 radiation 40.0 30 < th dose dependent rect. 6 19
440 106.90 atmosphere 1015.0 270 < th dose independent rect. 15 18
467 106.99 temperature 25.0 10 > th dose dependent sin 10 NA
474 107.02 atmosphere 1000.0 270 > th dose independent rect. 13 22
495 107.09 radiation 40.0 10 < th dose independent rect. 5 7
496 107.09 atmosphere 995.0 10 > th dose independent rect. 16 9
498 107.09 radiation 40.0 270 < th dose independent rect. 2 21
557 107.28 radiation 1.0 90 > th dose independent rect. 18 17
612 107.44 temperature 25.0 30 < th dose independent rect. 24 16
631 107.50 radiation 1.0 10 > th dose independent rect. 18 18
648 107.57 humidity 50.0 270 > th dose independent rect. 11 2
649 107.57 radiation 10.0 30 < th dose independent rect. 6 19
668 107.61 radiation 30.0 30 < th dose independent rect. 6 19
689 107.68 temperature 10.0 10 > th dose independent rect. 16 9
690 107.68 radiation 40.0 10 < th dose independent rect. 16 9
691 107.68 temperature 10.0 10 > th dose independent rect. 1 15
693 107.68 atmosphere 1015.0 10 < th dose independent rect. 1 15
696 107.68 radiation 40.0 30 < th dose dependent rect. 16 9
709 107.71 precipitation 0.1 10 < th dose independent rect. 16 9
715 107.71 precipitation 0.1 10 < th dose dependent rect. 16 9
716 107.72 wind 1.0 270 > th dose independent rect. 11 2
725 107.75 wind 9.0 270 < th dose independent rect. 11 2
726 107.75 temperature 10.0 270 > th dose independent rect. 11 2
727 107.75 atmosphere 995.0 270 > th dose independent rect. 11 2
728 107.75 atmosphere 1015.0 270 < th dose independent rect. 11 2
729 107.75 precipitation 0.1 270 < th dose independent rect. 11 2
733 107.75 temperature 10.0 270 > th dose independent rect. 13 22
734 107.75 precipitation 0.1 270 < th dose dependent rect. 11 2
740 107.77 wind 9.0 10 < th dose independent rect. 5 7
750 107.79 radiation 20.0 10 < th dose independent rect. 16 9
754 107.79 wind 9.0 270 < th dose dependent rect. 14 8
761 107.81 wind 9.0 270 < th dose dependent rect. 3 7
774 107.85 radiation 1.0 10 > th dose independent rect. 5 7
785 107.85 wind 9.0 10 < th dose independent rect. 12 17
795 107.88 precipitation 0.1 270 < th dose independent rect. 10 17
798 107.88 precipitation 0.1 270 < th dose dependent rect. 10 17
802 107.89 precipitation 0.1 270 < th dose independent rect. 4 17
804 107.89 precipitation 0.1 270 < th dose dependent rect. 4 17
810 107.91 radiation 40.0 10 < th dose independent rect. 17 18
838 107.96 temperature 15.0 10 > th dose independent rect. 12 17
849 107.99 humidity 90.0 270 < th dose independent rect. 9 6
857 108.00 temperature 10.0 90 > th dose independent rect. 1 14
859 108.00 atmosphere 1015.0 90 < th dose independent rect. 1 14
875 108.02 wind 9.0 10 < th dose independent rect. 16 9
888 108.03 radiation 1.0 90 < th dose dependent rect. 21 19
891 108.04 precipitation 0.1 10 < th dose independent rect. 5 7
895 108.04 precipitation 0.1 10 < th dose dependent rect. 5 7
921 108.08 atmosphere 1000.0 10 > th dose independent rect. 5 7
926 108.09 temperature 10.0 10 > th dose independent rect. 5 7
929 108.09 atmosphere 1015.0 10 < th dose independent rect. 5 7
979 108.18 atmosphere 1015.0 10 < th dose independent rect. 16 9
991 108.20 radiation 1.0 90 > th dose independent rect. 5 6