Os04g0438200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0438200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 319.53 | 0.833 | 332 | -2010 | 0.137 | 82500 | 0.333 | -504000 | -0.154 | 16.9 | 995 | 90 | -- | -- |
| 330.01 | 0.853 | 2.95 | -0.162 | 0.167 | 2.32 | 0.382 | -- | -0.159 | 17.1 | 995 | 90 | -- | -- |
| 319.62 | 0.833 | 332 | -2010 | 0.153 | 82500 | -- | -504000 | -0.152 | 18.2 | 995 | 90 | -- | -- |
| 317.14 | 0.829 | 2.93 | -0.0869 | 0.205 | 3.86 | -- | -- | -0.166 | 17 | 994.7 | 60 | -- | -- |
| 320.82 | 0.834 | 332 | -2010 | -- | 82500 | -- | -504000 | -0.156 | -- | 995 | 90 | -- | -- |
| 335.91 | 0.859 | 2.96 | -0.145 | 0.194 | -- | 0.488 | -- | -0.166 | 17 | -- | -- | -- | -- |
| 336.33 | 0.859 | 2.96 | -0.145 | 0.208 | -- | -- | -- | -0.164 | 18 | -- | -- | -- | -- |
| 317.35 | 0.83 | 2.95 | -0.155 | -- | 4.34 | -- | -- | -0.15 | -- | 994.7 | 87 | -- | -- |
| 316.93 | 0.829 | 2.95 | -- | 0.156 | 4.34 | -- | -- | -0.13 | 18 | 994.7 | 89 | -- | -- |
| 338.57 | 0.86 | 2.95 | -0.151 | -- | -- | -- | -- | -0.169 | -- | -- | -- | -- | -- |
| 336.89 | 0.859 | 2.95 | -- | 0.21 | -- | -- | -- | -0.148 | 18 | -- | -- | -- | -- |
| 318.18 | 0.831 | 2.95 | -- | -- | 4.42 | -- | -- | -0.136 | -- | 994.7 | 94 | -- | -- |
| 339.17 | 0.86 | 2.95 | -- | -- | -- | -- | -- | -0.152 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 311.13 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 20 | 1 |
| 2 | 311.30 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 19 | 3 |
| 3 | 311.58 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 19 | 4 |
| 20 | 315.30 | atmosphere | 995.0 | 10 | > th | dose independent | sin | 10 | NA |
| 24 | 315.64 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 7 | 16 |
| 27 | 315.76 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 16 | 2 |
| 35 | 315.99 | atmosphere | 995.0 | 30 | < th | dose independent | sin | 10 | NA |
| 36 | 316.00 | atmosphere | 995.0 | 30 | < th | dose dependent | sin | 10 | NA |
| 38 | 316.02 | atmosphere | 995.0 | 90 | < th | dose independent | rect. | 16 | 23 |
| 42 | 316.08 | atmosphere | 995.0 | 90 | < th | dose dependent | rect. | 17 | 22 |
| 43 | 316.10 | atmosphere | 995.0 | 90 | < th | dose dependent | sin | 8 | NA |
| 47 | 316.19 | atmosphere | 995.0 | 90 | < th | dose independent | sin | 8 | NA |
| 72 | 316.23 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 16 | 2 |
| 155 | 317.11 | humidity | 70.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 193 | 317.18 | wind | 7.0 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 400 | 317.35 | temperature | 30.0 | 10 | > th | dose independent | rect. | 16 | 3 |
| 527 | 317.56 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 530 | 317.63 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 11 | 11 |
| 589 | 317.94 | wind | 5.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 703 | 319.22 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 23 | 23 |
| 704 | 319.23 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 719 | 319.29 | humidity | 80.0 | 30 | > th | dose independent | rect. | 7 | 16 |
| 746 | 319.52 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 747 | 319.53 | atmosphere | 995.0 | 90 | < th | dose dependent | no | NA | NA |
| 965 | 319.81 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 975 | 319.81 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 988 | 319.93 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 17 | 5 |
| 992 | 319.95 | radiation | 10.0 | 90 | > th | dose independent | rect. | 17 | 1 |