Os04g0437000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os04g0437000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.11 | 0.428 | 3.36 | 0.176 | 0.132 | 1.71 | -0.0264 | 3.81 | -0.0505 | 7.46 | 19.63 | 962 | -- | -- |
| 91.33 | 0.445 | 3.29 | 0.355 | 0.144 | 0.573 | 0.323 | -- | 0.0272 | 7.23 | 21.76 | 1012 | -- | -- |
| 83.11 | 0.425 | 3.36 | 0.176 | 0.134 | 1.7 | -- | 3.79 | -0.0501 | 7.53 | 19.68 | 971 | -- | -- |
| 90.18 | 0.442 | 3.3 | 0.344 | 0.118 | 0.506 | -- | -- | 0.0248 | 8.39 | 24.42 | 861 | -- | -- |
| 84.02 | 0.427 | 3.36 | 0.185 | -- | 1.7 | -- | 3.72 | -0.0471 | -- | 19.77 | 908 | -- | -- |
| 93.18 | 0.453 | 3.33 | 0.189 | 0.164 | -- | 0.426 | -- | -0.0722 | 10.4 | -- | -- | -- | -- |
| 93.8 | 0.454 | 3.32 | 0.204 | 0.172 | -- | -- | -- | -0.0723 | 9.34 | -- | -- | -- | -- |
| 90.88 | 0.444 | 3.3 | 0.357 | -- | 0.538 | -- | -- | 0.0411 | -- | 25.01 | 798 | -- | -- |
| 92.93 | 0.449 | 3.32 | -- | 0.133 | 0.346 | -- | -- | -0.0367 | 8.67 | 24.4 | 840 | -- | -- |
| 95.52 | 0.457 | 3.33 | 0.203 | -- | -- | -- | -- | -0.0716 | -- | -- | -- | -- | -- |
| 94.89 | 0.456 | 3.33 | -- | 0.172 | -- | -- | -- | -0.095 | 9.25 | -- | -- | -- | -- |
| 93.84 | 0.451 | 3.32 | -- | -- | 0.388 | -- | -- | -0.0242 | -- | 25.29 | 780 | -- | -- |
| 96.61 | 0.459 | 3.33 | -- | -- | -- | -- | -- | -0.0941 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.36 | humidity | 90 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 2 | 82.51 | humidity | 90 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 3 | 82.53 | humidity | 90 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 7 | 82.72 | temperature | 20 | 720 | > th | dose independent | rect. | 7 | 8 |
| 8 | 82.97 | temperature | 20 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 9 | 83.16 | temperature | 20 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 10 | 83.17 | temperature | 20 | 1440 | < th | dose dependent | rect. | 19 | 6 |
| 11 | 83.19 | wind | 9 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 43 | 83.19 | wind | 9 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 79 | 83.24 | temperature | 20 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 81 | 83.25 | temperature | 20 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 83 | 83.26 | temperature | 20 | 1440 | < th | dose dependent | rect. | 12 | 13 |
| 87 | 83.28 | temperature | 20 | 1440 | < th | dose dependent | sin | 20 | NA |
| 88 | 83.28 | temperature | 20 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 93 | 83.29 | temperature | 20 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 98 | 83.29 | temperature | 20 | 1440 | < th | dose dependent | rect. | 7 | 17 |
| 101 | 83.31 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 134 | 83.44 | temperature | 20 | 720 | < th | dose dependent | rect. | 24 | 9 |
| 137 | 83.49 | temperature | 20 | 720 | < th | dose independent | rect. | 7 | 2 |
| 182 | 83.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 9 |
| 186 | 83.65 | wind | 1 | 720 | < th | dose dependent | rect. | 6 | 3 |
| 191 | 83.66 | temperature | 20 | 720 | < th | dose dependent | sin | 5 | NA |
| 200 | 83.68 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 6 |
| 212 | 83.70 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 6 |
| 223 | 83.72 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 4 |
| 225 | 83.72 | temperature | 20 | 720 | < th | dose dependent | rect. | 24 | 5 |
| 236 | 83.74 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 237 | 83.74 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 246 | 83.76 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 9 |
| 308 | 83.85 | temperature | 20 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 324 | 83.87 | temperature | 20 | 720 | < th | dose dependent | rect. | 24 | 3 |
| 386 | 83.93 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 14 |
| 398 | 83.93 | temperature | 20 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 400 | 83.94 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 432 | 83.96 | temperature | 20 | 720 | < th | dose dependent | no | NA | NA |
| 489 | 84.05 | temperature | 20 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 507 | 84.08 | wind | 1 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 580 | 84.28 | temperature | 20 | 720 | < th | dose independent | sin | 1 | NA |
| 599 | 84.36 | temperature | 20 | 720 | > th | dose independent | sin | 0 | NA |
| 618 | 84.42 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 16 |
| 659 | 84.59 | wind | 1 | 720 | < th | dose independent | rect. | 6 | 3 |
| 669 | 84.63 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 9 |
| 670 | 84.63 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 12 |
| 732 | 84.93 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 8 |
| 737 | 84.94 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 6 |
| 752 | 85.04 | radiation | 30 | 270 | > th | dose independent | rect. | 9 | 1 |
| 800 | 85.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 18 |
| 879 | 85.36 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 884 | 85.38 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 910 | 85.43 | wind | 1 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 916 | 85.45 | wind | 1 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 932 | 85.49 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 967 | 85.56 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 4 |