Os04g0436900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os04g0436900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 219.99 | 0.697 | 4.51 | -2.57 | 0.383 | 0.0693 | 0.838 | 5.78 | 0.756 | 2.71 | 66.53 | 7286 | -- | -- |
| 267.19 | 0.767 | 4.57 | -1.73 | 0.188 | 0.872 | -0.597 | -- | 0.899 | 12 | 49.92 | 1859 | -- | -- |
| 221.97 | 0.694 | 4.51 | -2.59 | 0.392 | 0.0786 | -- | 5.73 | 0.761 | 3.37 | 66.73 | 7367 | -- | -- |
| 268.55 | 0.768 | 4.56 | -1.76 | 0.267 | 0.763 | -- | -- | 0.944 | 13 | 66.73 | 7367 | -- | -- |
| 230.64 | 0.707 | 4.51 | -2.57 | -- | 0.11 | -- | 5.66 | 0.776 | -- | 66.98 | 7391 | -- | -- |
| 280.29 | 0.785 | 4.57 | -1.74 | 0.357 | -- | 0.689 | -- | 0.882 | 2.89 | -- | -- | -- | -- |
| 281.75 | 0.786 | 4.58 | -1.76 | 0.368 | -- | -- | -- | 0.877 | 3.44 | -- | -- | -- | -- |
| 270.55 | 0.769 | 4.57 | -1.76 | -- | 0.561 | -- | -- | 0.925 | -- | 66.73 | 7367 | -- | -- |
| 332.99 | 0.85 | 4.57 | -- | 0.163 | 1.19 | -- | -- | 1.19 | 0.962 | 95 | 16503 | -- | -- |
| 289.36 | 0.795 | 4.58 | -1.74 | -- | -- | -- | -- | 0.887 | -- | -- | -- | -- | -- |
| 363.14 | 0.891 | 4.53 | -- | 0.333 | -- | -- | -- | 1.07 | 3.45 | -- | -- | -- | -- |
| 297.77 | 0.804 | 4.46 | -- | -- | 1.38 | -- | -- | 1.38 | -- | 94.8 | 47520 | -- | -- |
| 369.38 | 0.897 | 4.53 | -- | -- | -- | -- | -- | 1.08 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 212.41 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 2 | 212.72 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 6 | 215.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 7 | 216.46 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 9 | 217.83 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 10 | 217.97 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 12 |
| 12 | 218.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 13 | 218.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 17 | 218.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 18 | 218.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 24 | 219.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 25 | 219.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 26 | 219.36 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 29 | 219.46 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 31 | 219.59 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 33 | 219.71 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 6 |
| 37 | 219.96 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 46 | 220.31 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 49 | 220.36 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 63 | 220.92 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 83 | 221.42 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 101 | 221.76 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 102 | 221.76 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 116 | 221.94 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 7 |
| 120 | 221.98 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 125 | 222.02 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 132 | 222.12 | humidity | 50.0 | 14400 | > th | dose dependent | sin | 21 | NA |
| 177 | 222.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 267 | 222.58 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 272 | 222.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 273 | 222.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 298 | 222.66 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 5 |
| 299 | 222.66 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 5 |
| 334 | 222.76 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 337 | 222.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 386 | 222.93 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 389 | 222.94 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 391 | 222.95 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 411 | 223.01 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 433 | 223.10 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 441 | 223.13 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 503 | 223.32 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 523 | 223.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 525 | 223.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 6 |
| 558 | 223.46 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 5 |
| 561 | 223.48 | humidity | 90.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 580 | 223.55 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 618 | 223.63 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 19 |
| 640 | 223.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 730 | 223.92 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 14 |
| 972 | 224.53 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 6 |
| 990 | 224.56 | humidity | 50.0 | 14400 | > th | dose dependent | no | NA | NA |