Os04g0433200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Etoposide-induced 2.4 family protein.
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Os04g0433200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Etoposide-induced 2.4 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.82 | 0.535 | 8.43 | -3.04 | 0.937 | 1.31 | 0.129 | -1.59 | -0.414 | 7.83 | 20.07 | 1358 | -- | -- |
| 132.17 | 0.535 | 8.37 | -2.59 | 0.971 | 1.32 | 0.186 | -- | -0.3 | 8.07 | 19.35 | 1226 | -- | -- |
| 129.35 | 0.53 | 8.43 | -3.07 | 0.975 | 1.35 | -- | -1.84 | -0.425 | 8.08 | 20.79 | 1237 | -- | -- |
| 132.22 | 0.536 | 8.37 | -2.54 | 0.938 | 1.2 | -- | -- | -0.272 | 7.88 | 20.54 | 1309 | -- | -- |
| 177.07 | 0.62 | 8.45 | -3.02 | -- | 1.32 | -- | -1.58 | -0.407 | -- | 20.68 | 1395 | -- | -- |
| 177.92 | 0.625 | 8.3 | -2.12 | 0.957 | -- | 0.136 | -- | 0.00206 | 7.34 | -- | -- | -- | -- |
| 177.97 | 0.625 | 8.3 | -2.12 | 0.958 | -- | -- | -- | 0.00177 | 7.33 | -- | -- | -- | -- |
| 179.22 | 0.624 | 8.39 | -2.54 | -- | 1.19 | -- | -- | -0.266 | -- | 20.73 | 1398 | -- | -- |
| 285.36 | 0.787 | 8.26 | -- | 1.18 | 0.709 | -- | -- | 0.147 | 7.55 | 22 | 678 | -- | -- |
| 226.71 | 0.704 | 8.33 | -2.1 | -- | -- | -- | -- | 0.0177 | -- | -- | -- | -- | -- |
| 296.02 | 0.805 | 8.25 | -- | 0.938 | -- | -- | -- | 0.237 | 7.48 | -- | -- | -- | -- |
| 327.66 | 0.843 | 8.25 | -- | -- | 0.574 | -- | -- | 0.366 | -- | 32.72 | 2658 | -- | -- |
| 343.05 | 0.865 | 8.27 | -- | -- | -- | -- | -- | 0.251 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.98 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 3 | 127.11 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 6 | 127.32 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 10 | 127.60 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 11 | 127.73 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 12 | 128.17 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 16 | 128.25 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 17 | 128.35 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 8 |
| 31 | 128.96 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 16 |
| 35 | 129.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 69 | 129.25 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 91 | 129.37 | temperature | 10 | 1440 | > th | dose dependent | sin | 22 | NA |
| 141 | 129.49 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 146 | 129.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 151 | 129.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 152 | 129.52 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 158 | 129.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 235 | 129.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 236 | 129.72 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 302 | 129.88 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 10 |
| 362 | 129.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 388 | 130.04 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 396 | 130.05 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 397 | 130.05 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 421 | 130.08 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 487 | 130.19 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 508 | 130.24 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 553 | 130.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 606 | 130.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 23 |