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Os04g0432400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Plant neutral invertase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0173) R2 : 0.698
β1 : -0.935 (0.0633) R2dD : 0.15 R2D : 0.141
β2 : 1.29 (0.0447) R2dC : 0.556 R2C : 0.548
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0013 (0.0369) R2dN8 : 1.1e-06 R2N8 : -0.00326
σ : 0.325
deviance : 48.26
__
_____
C
peak time of C : 7.26
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
41.32 0.302 12.5 -0.866 1.2 -0.619 -0.622 0.073 0.0544 8.02 30.01 271 -- --
41.23 0.299 12.5 -0.878 1.2 -0.579 -0.572 -- 0.0517 8 28.68 263 -- --
42.45 0.303 12.5 -0.888 1.2 -0.612 -- 0.0101 0.0512 8.02 30.03 267 -- --
42.37 0.303 12.5 -0.902 1.21 -0.575 -- -- 0.0485 8.07 28.48 262 -- --
65.88 0.378 12.5 -0.473 -- -1.26 -- 0.635 0.125 -- 2.17 812 -- --
47.37 0.323 12.5 -0.922 1.29 -- -0.575 -- 0.00023 7.27 -- -- -- --
48.26 0.325 12.5 -0.935 1.29 -- -- -- 0.0013 7.26 -- -- -- --
59.18 0.358 12.5 -0.687 -- -1.62 -- -- 0.253 -- 2.179 846 -- --
63.76 0.372 12.5 -- 1.14 -0.603 -- -- 0.151 7.92 30.03 333 -- --
136.37 0.546 12.5 -0.912 -- -- -- -- 0.0233 -- -- -- -- --
71.28 0.395 12.5 -- 1.28 -- -- -- 0.105 7.3 -- -- -- --
74.03 0.401 12.5 -- -- -1.76 -- -- 0.173 -- 1.33 899 -- --
158.31 0.587 12.5 -- -- -- -- -- 0.124 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.49 radiation 40.0 270 < th dose independent rect. 3 20
3 35.56 radiation 40.0 270 < th dose independent rect. 3 8
6 35.61 radiation 40.0 270 < th dose dependent rect. 3 20
9 35.68 radiation 40.0 270 < th dose dependent rect. 4 18
12 35.93 humidity 50.0 270 > th dose dependent rect. 21 7
13 35.95 humidity 50.0 270 > th dose dependent rect. 22 5
15 36.00 radiation 20.0 270 < th dose independent rect. 17 16
19 36.17 atmosphere 1010.0 10 < th dose independent rect. 24 18
31 36.43 radiation 40.0 90 < th dose dependent rect. 6 18
34 36.47 wind 1.0 270 > th dose independent rect. 3 19
38 36.50 precipitation 0.1 270 < th dose independent rect. 3 19
40 36.50 precipitation 0.1 270 < th dose dependent rect. 3 19
41 36.51 radiation 1.0 90 < th dose independent rect. 23 8
46 36.59 precipitation 0.1 270 < th dose independent rect. 4 17
47 36.59 precipitation 0.1 270 < th dose dependent rect. 4 17
48 36.61 precipitation 0.1 270 < th dose independent rect. 17 15
49 36.61 precipitation 0.1 270 < th dose dependent rect. 17 15
50 36.62 wind 9.0 270 < th dose independent rect. 23 16
53 36.67 radiation 40.0 10 < th dose dependent rect. 6 18
54 36.68 radiation 40.0 270 < th dose dependent rect. 17 16
55 36.70 temperature 15.0 270 > th dose independent rect. 23 16
57 36.73 temperature 10.0 270 > th dose independent rect. 21 7
58 36.73 temperature 30.0 270 < th dose independent rect. 21 7
59 36.73 humidity 50.0 270 > th dose independent rect. 21 7
62 36.73 atmosphere 995.0 270 > th dose independent rect. 21 7
63 36.73 radiation 1.0 270 < th dose independent rect. 21 7
68 36.73 temperature 10.0 270 > th dose independent rect. 4 17
70 36.73 radiation 1.0 270 < th dose dependent rect. 21 7
76 36.74 radiation 1.0 90 < th dose dependent sin 7 NA
77 36.74 wind 9.0 270 < th dose dependent rect. 21 7
79 36.75 radiation 1.0 90 > th dose independent sin 7 NA
80 36.75 radiation 1.0 90 < th dose independent sin 7 NA
81 36.75 wind 9.0 270 < th dose independent rect. 21 7
82 36.75 wind 9.0 270 < th dose independent rect. 8 9
87 36.78 temperature 10.0 270 > th dose independent rect. 15 8
90 36.80 precipitation 0.1 270 < th dose independent rect. 22 5
91 36.80 radiation 40.0 270 < th dose independent rect. 15 8
92 36.80 precipitation 0.1 270 < th dose dependent rect. 22 5
93 36.81 wind 9.0 270 < th dose independent rect. 22 5
94 36.81 temperature 10.0 270 > th dose independent rect. 22 5
95 36.81 temperature 30.0 270 < th dose independent rect. 22 5
96 36.81 humidity 50.0 270 > th dose independent rect. 22 5
99 36.81 atmosphere 995.0 270 > th dose independent rect. 22 5
100 36.81 radiation 1.0 270 < th dose independent rect. 22 5
106 36.81 temperature 10.0 270 > th dose independent rect. 3 19
107 36.81 radiation 1.0 270 < th dose dependent rect. 22 5
114 36.82 atmosphere 1015.0 270 < th dose independent rect. 23 16
121 36.84 wind 9.0 270 < th dose dependent rect. 22 5
123 36.85 wind 1.0 270 > th dose independent rect. 16 6
125 36.85 atmosphere 1005.0 270 > th dose dependent rect. 4 3
145 36.87 precipitation 0.1 270 < th dose independent rect. 15 8
146 36.87 precipitation 0.1 270 < th dose dependent rect. 15 8
148 36.88 wind 9.0 270 < th dose independent rect. 22 18
151 36.90 precipitation 0.1 270 < th dose independent rect. 16 6
153 36.90 precipitation 0.1 270 < th dose dependent rect. 16 6
156 36.92 temperature 15.0 270 > th dose independent rect. 22 18
158 36.92 radiation 1.0 90 < th dose dependent rect. 23 8
159 36.93 radiation 1.0 90 < th dose independent rect. 23 17
164 36.97 atmosphere 1010.0 270 < th dose independent rect. 22 5
166 36.99 precipitation 0.1 270 < th dose independent rect. 21 7
168 36.99 precipitation 0.1 270 < th dose dependent rect. 21 7
177 37.02 wind 1.0 270 > th dose independent rect. 15 8
178 37.02 atmosphere 995.0 270 > th dose independent rect. 23 16
180 37.03 wind 9.0 270 < th dose independent rect. 11 16
182 37.04 atmosphere 1015.0 270 < th dose independent rect. 4 17
186 37.05 radiation 1.0 90 < th dose dependent rect. 23 17
187 37.06 wind 9.0 270 < th dose independent rect. 15 8
188 37.06 precipitation 0.1 270 < th dose independent rect. 3 8
189 37.06 precipitation 0.1 270 < th dose dependent rect. 3 8
191 37.07 temperature 10.0 270 > th dose independent rect. 8 9
192 37.07 atmosphere 1015.0 270 < th dose independent rect. 8 9
193 37.07 temperature 10.0 270 > th dose independent rect. 17 15
201 37.09 temperature 10.0 270 > th dose independent rect. 16 6
202 37.09 radiation 40.0 270 < th dose independent rect. 16 6
204 37.09 wind 1.0 270 > th dose independent rect. 17 14
205 37.09 wind 1.0 270 > th dose independent rect. 4 17
225 37.14 wind 9.0 270 < th dose independent rect. 17 15
229 37.16 precipitation 0.1 270 < th dose independent rect. 8 9
231 37.16 precipitation 0.1 270 < th dose dependent rect. 8 9
242 37.20 atmosphere 1015.0 270 < th dose independent rect. 22 18
243 37.21 radiation 40.0 90 < th dose independent rect. 5 9
246 37.24 wind 9.0 270 < th dose independent rect. 16 6
270 37.27 precipitation 0.1 270 < th dose independent rect. 23 16
272 37.27 precipitation 0.1 270 < th dose dependent rect. 23 16
278 37.29 radiation 40.0 270 < th dose dependent rect. 4 7
288 37.33 temperature 10.0 270 > th dose independent rect. 3 8
289 37.33 atmosphere 995.0 270 > th dose independent rect. 3 8
290 37.33 atmosphere 1015.0 270 < th dose independent rect. 3 8
291 37.33 temperature 10.0 270 > th dose independent rect. 11 16
299 37.38 wind 9.0 270 < th dose independent rect. 3 8
303 37.41 wind 9.0 270 < th dose independent rect. 4 17
324 37.45 wind 9.0 270 < th dose independent rect. 3 19
325 37.46 precipitation 0.1 270 < th dose independent rect. 22 18
326 37.46 precipitation 0.1 270 < th dose dependent rect. 22 18
329 37.48 radiation 40.0 90 < th dose dependent rect. 17 7
337 37.50 atmosphere 995.0 270 > th dose independent rect. 22 18
350 37.53 humidity 50.0 270 > th dose independent rect. 3 8
352 37.53 temperature 10.0 270 > th dose dependent rect. 22 5
375 37.58 wind 1.0 270 > th dose independent rect. 8 9
378 37.58 radiation 10.0 10 < th dose dependent rect. 24 6
394 37.61 atmosphere 995.0 270 > th dose dependent rect. 3 6
396 37.62 atmosphere 995.0 90 > th dose independent rect. 17 7
401 37.64 humidity 60.0 10 > th dose dependent rect. 24 6
418 37.69 humidity 50.0 270 > th dose independent rect. 17 15
419 37.70 humidity 50.0 90 > th dose independent rect. 17 7
425 37.72 atmosphere 1005.0 10 > th dose dependent rect. 6 3
427 37.72 radiation 40.0 270 < th dose dependent rect. 15 7
452 37.80 precipitation 0.1 270 < th dose independent rect. 11 16
457 37.80 precipitation 0.1 270 < th dose dependent rect. 11 16
460 37.81 atmosphere 1000.0 10 > th dose independent rect. 24 6
482 37.88 radiation 40.0 10 < th dose dependent rect. 6 8
485 37.90 atmosphere 995.0 270 > th dose independent rect. 17 15
500 37.93 atmosphere 1010.0 10 < th dose independent rect. 24 7
502 37.93 atmosphere 995.0 270 > th dose independent rect. 3 19
518 37.99 atmosphere 995.0 270 > th dose independent rect. 4 17
521 37.99 humidity 60.0 10 > th dose dependent rect. 22 8
548 38.06 atmosphere 995.0 270 > th dose independent rect. 11 16
552 38.07 atmosphere 1015.0 270 < th dose independent rect. 16 6
553 38.07 atmosphere 995.0 270 > th dose independent rect. 8 9
557 38.07 radiation 10.0 10 < th dose dependent rect. 17 7
611 38.18 radiation 40.0 10 < th dose dependent rect. 6 6
657 38.25 radiation 10.0 10 < th dose independent rect. 24 6
659 38.25 atmosphere 995.0 10 > th dose independent rect. 6 18
681 38.29 wind 9.0 10 < th dose independent rect. 24 6
682 38.29 temperature 10.0 10 > th dose independent rect. 24 6
683 38.29 temperature 30.0 10 < th dose independent rect. 24 6
684 38.29 humidity 50.0 10 > th dose independent rect. 24 6
692 38.29 radiation 1.0 270 > th dose independent rect. 9 8
695 38.29 temperature 10.0 10 > th dose independent rect. 6 18
706 38.31 temperature 30.0 270 < th dose independent rect. 3 8
708 38.31 wind 9.0 10 < th dose independent rect. 24 18
733 38.35 precipitation 0.1 270 < th dose independent rect. 17 4
749 38.35 precipitation 0.1 270 < th dose dependent rect. 17 4
782 38.39 wind 9.0 270 < th dose independent rect. 21 20
838 38.43 temperature 15.0 270 > th dose independent rect. 21 20
877 38.50 wind 9.0 10 < th dose dependent rect. 22 8
894 38.52 precipitation 0.1 10 < th dose independent rect. 6 18
896 38.52 precipitation 0.1 10 < th dose dependent rect. 6 18
912 38.55 wind 1.0 270 > th dose independent rect. 3 7
928 38.56 radiation 1.0 270 < th dose dependent rect. 21 10
929 38.57 temperature 15.0 10 > th dose independent rect. 24 18
935 38.59 temperature 10.0 10 > th dose independent rect. 18 6
937 38.59 radiation 20.0 10 < th dose independent rect. 18 6
950 38.60 radiation 20.0 10 < th dose independent rect. 6 6
960 38.62 temperature 10.0 270 > th dose independent rect. 17 4
961 38.62 radiation 20.0 270 < th dose independent rect. 17 4
964 38.62 atmosphere 995.0 10 > th dose independent rect. 18 6
968 38.62 radiation 20.0 10 < th dose independent rect. 6 8
975 38.62 wind 9.0 10 < th dose dependent rect. 24 6
981 38.63 atmosphere 995.0 270 > th dose independent rect. 15 8