Os04g0432000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Serine/threonine-protein kinase SAPK7 (EC 2.7.1.37) (Osmotic stress/abscisic acid-activated protein kinase 7).
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Os04g0432000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Serine/threonine-protein kinase SAPK7 (EC 2.7.1.37) (Osmotic stress/abscisic acid-activated protein kinase 7).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139.19 | 0.554 | 10.5 | -0.479 | 3.63 | -4.6 | 1.41 | 0.747 | -0.413 | 23.4 | 2.481 | 779 | 11.8 | -- |
| 139.14 | 0.549 | 10.5 | -0.515 | 3.52 | -4.68 | 1.61 | -- | -0.423 | 23.5 | 2.061 | 796 | 11.8 | -- |
| 144.04 | 0.559 | 10.5 | -0.592 | 3.65 | -4.64 | -- | 2.04 | -0.421 | 23.4 | 2.221 | 783 | 12 | -- |
| 149.99 | 0.57 | 10.5 | -0.615 | 3.55 | -4.78 | -- | -- | -0.414 | 23.4 | 1.24 | 790 | 12.1 | -- |
| 298.55 | 0.805 | 10.4 | 0.0333 | -- | -5.08 | -- | -2.41 | -0.78 | -- | 0.3921 | 1072 | 9.73 | -- |
| 195.21 | 0.655 | 10.5 | -0.265 | 3.68 | -- | 1.35 | -- | -0.301 | 20 | -- | -- | -- | -- |
| 200.44 | 0.663 | 10.5 | -0.3 | 3.68 | -- | -- | -- | -0.298 | 19.9 | -- | -- | -- | -- |
| 187.07 | 0.637 | 10.5 | -0.337 | -- | -4.19 | -- | -- | -0.444 | -- | 45.98 | 1057 | 7.17 | -- |
| 158.9 | 0.587 | 10.5 | -- | 3.47 | -4.83 | -- | -- | -0.361 | 23.7 | 2.218 | 795 | 11.5 | -- |
| 939.58 | 1.43 | 10.4 | -0.339 | -- | -- | -- | -- | -0.347 | -- | -- | -- | -- | -- |
| 202.8 | 0.666 | 10.5 | -- | 3.69 | -- | -- | -- | -0.265 | 19.9 | -- | -- | -- | -- |
| 190.17 | 0.642 | 10.4 | -- | -- | -4.15 | -- | -- | -0.391 | -- | 51.14 | 1069 | 7.27 | -- |
| 942.61 | 1.43 | 10.4 | -- | -- | -- | -- | -- | -0.309 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.34 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 9 |
| 9 | 146.07 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 9 |
| 14 | 146.72 | radiation | 1.0 | 720 | < th | dose independent | sin | 17 | NA |
| 33 | 148.68 | radiation | 1.0 | 720 | > th | dose independent | rect. | 8 | 21 |
| 36 | 148.91 | radiation | 1.0 | 720 | > th | dose independent | rect. | 8 | 11 |
| 47 | 149.04 | radiation | 1.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 71 | 149.32 | radiation | 1.0 | 720 | > th | dose independent | sin | 18 | NA |
| 124 | 152.96 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 16 |
| 128 | 153.13 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 6 |
| 142 | 153.46 | radiation | 1.0 | 720 | < th | dose independent | rect. | 13 | 16 |
| 147 | 153.73 | radiation | 1.0 | 720 | < th | dose independent | rect. | 10 | 19 |
| 157 | 154.40 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 13 | 16 |
| 245 | 156.56 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 339 | 158.19 | humidity | 70.0 | 720 | > th | dose independent | rect. | 14 | 17 |
| 389 | 159.10 | humidity | 70.0 | 720 | > th | dose independent | rect. | 14 | 9 |
| 393 | 159.24 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 402 | 159.40 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 11 | 13 |
| 409 | 159.52 | temperature | 25.0 | 720 | < th | dose independent | rect. | 14 | 8 |
| 410 | 159.52 | temperature | 25.0 | 720 | < th | dose independent | rect. | 13 | 10 |
| 477 | 160.59 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 11 | 19 |
| 482 | 160.73 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 23 | 6 |
| 493 | 160.86 | radiation | 1.0 | 720 | < th | dose independent | rect. | 3 | 21 |
| 498 | 160.93 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 14 |
| 499 | 160.93 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 501 | 160.97 | radiation | 1.0 | 720 | < th | dose independent | rect. | 1 | 23 |
| 511 | 161.14 | humidity | 70.0 | 720 | > th | dose independent | sin | 13 | NA |
| 513 | 161.16 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 526 | 161.33 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 23 |
| 532 | 161.40 | wind | 5.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 534 | 161.43 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 536 | 161.46 | temperature | 25.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 543 | 161.56 | temperature | 25.0 | 720 | < th | dose independent | rect. | 15 | 5 |
| 549 | 161.59 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 17 |
| 558 | 161.65 | humidity | 50.0 | 720 | > th | dose dependent | sin | 17 | NA |
| 560 | 161.68 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 7 |
| 586 | 161.87 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 15 |
| 592 | 161.93 | wind | 9.0 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 597 | 161.98 | radiation | 20.0 | 270 | < th | dose independent | rect. | 18 | 14 |
| 601 | 162.07 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 10 |
| 624 | 162.33 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 5 |
| 639 | 162.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 11 |
| 641 | 162.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 11 |
| 642 | 162.43 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 7 |
| 670 | 162.67 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 681 | 162.75 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 3 | 21 |
| 689 | 162.82 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 15 | 14 |
| 693 | 162.84 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 7 |
| 702 | 162.87 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 733 | 163.16 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 752 | 163.32 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 757 | 163.36 | temperature | 25.0 | 720 | < th | dose independent | sin | 17 | NA |
| 758 | 163.36 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 761 | 163.37 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 770 | 163.43 | wind | 7.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 783 | 163.53 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 10 |
| 784 | 163.53 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 831 | 163.66 | temperature | 15.0 | 90 | > th | dose independent | rect. | 15 | 14 |
| 835 | 163.70 | radiation | 20.0 | 720 | < th | dose independent | rect. | 15 | 16 |
| 838 | 163.73 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 23 | 6 |
| 840 | 163.73 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 855 | 163.83 | temperature | 20.0 | 720 | < th | dose independent | rect. | 2 | 5 |
| 858 | 163.86 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 859 | 163.86 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 865 | 163.90 | temperature | 25.0 | 270 | < th | dose independent | sin | 15 | NA |
| 866 | 163.90 | temperature | 25.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 900 | 164.05 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 18 | 14 |
| 903 | 164.07 | temperature | 15.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 912 | 164.10 | temperature | 10.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 913 | 164.10 | temperature | 30.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 914 | 164.10 | humidity | 50.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 917 | 164.10 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 942 | 164.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 11 |
| 957 | 164.21 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 970 | 164.27 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 974 | 164.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 11 |
| 975 | 164.29 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 11 |
| 976 | 164.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 13 |