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Os04g0431300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.017) R2 : 0.0233
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.118 (0.0358) R2dN8 : 0.0301 R2N8 : 0.0233
σ : 0.32
deviance : 47.03
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.87 0.209 10.3 0.687 0.307 -0.253 -0.252 0.0186 -0.0258 20 14.74 25 -- --
19.84 0.207 10.3 0.686 0.314 -0.257 -0.282 -- -0.0211 20 14.05 43 -- --
20.02 0.208 10.3 0.701 0.32 -0.244 -- 0.0809 -0.0323 20.1 14.47 37 -- --
20.05 0.209 10.3 0.695 0.314 -0.257 -- -- -0.0196 20 14.32 43 -- --
24.74 0.232 10.3 0.711 -- -0.317 -- 0.105 -0.0187 -- 13.97 39 -- --
21.93 0.22 10.3 0.668 0.462 -- -0.152 -- -0.0429 21.9 -- -- -- --
22.02 0.22 10.3 0.674 0.463 -- -- -- -0.0427 21.9 -- -- -- --
24.35 0.23 10.3 0.696 -- -0.342 -- -- -0.0364 -- 14.73 17 -- --
33.04 0.268 10.3 -- 0.321 -0.24 -- -- -0.0729 20.1 15 61 -- --
34.86 0.276 10.3 0.679 -- -- -- -- -0.0427 -- -- -- -- --
33.99 0.273 10.4 -- 0.465 -- -- -- -0.118 22 -- -- -- --
35.11 0.277 10.3 -- -- -0.339 -- -- -0.142 -- 9.37 21 -- --
47.03 0.32 10.3 -- -- -- -- -- -0.118 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 18.95 humidity 80.0 10 > th dose independent rect. 6 4
2 18.98 radiation 10.0 10 < th dose independent rect. 6 14
4 19.04 wind 1.0 270 > th dose independent rect. 4 1
5 19.05 humidity 80.0 10 > th dose independent rect. 6 2
7 19.07 radiation 10.0 10 < th dose independent rect. 6 10
8 19.11 radiation 20.0 10 < th dose dependent rect. 6 3
10 19.16 humidity 80.0 10 > th dose independent rect. 6 10
12 19.19 radiation 10.0 10 < th dose independent rect. 6 4
14 19.25 radiation 10.0 10 < th dose independent rect. 6 2
16 19.25 radiation 20.0 10 < th dose dependent rect. 6 14
19 19.27 radiation 10.0 90 < th dose dependent rect. 6 1
24 19.33 humidity 80.0 10 > th dose independent rect. 6 8
26 19.35 humidity 70.0 10 > th dose dependent rect. 6 4
30 19.37 radiation 20.0 10 < th dose dependent rect. 6 10
31 19.38 radiation 10.0 10 < th dose independent rect. 6 8
38 19.40 wind 1.0 10 > th dose independent rect. 4 16
45 19.45 wind 1.0 90 > th dose independent rect. 4 4
50 19.48 atmosphere 1005.0 90 > th dose dependent rect. 24 8
53 19.50 temperature 25.0 10 > th dose independent rect. 1 7
57 19.52 radiation 10.0 90 < th dose independent rect. 6 3
60 19.52 temperature 15.0 10 > th dose independent rect. 7 23
61 19.52 humidity 70.0 10 > th dose dependent rect. 6 2
63 19.52 radiation 20.0 90 < th dose dependent rect. 5 5
67 19.54 atmosphere 1005.0 270 > th dose dependent rect. 3 1
68 19.54 humidity 70.0 10 > th dose dependent rect. 6 10
72 19.56 radiation 20.0 90 < th dose independent rect. 23 11
79 19.58 temperature 25.0 10 > th dose independent rect. 3 5
82 19.58 radiation 20.0 90 < th dose dependent rect. 5 12
83 19.59 humidity 90.0 10 < th dose independent rect. 4 3
84 19.59 radiation 10.0 10 < th dose independent rect. 6 12
88 19.59 atmosphere 995.0 30 > th dose dependent rect. 7 23
91 19.61 radiation 20.0 10 < th dose dependent rect. 6 8
102 19.64 temperature 15.0 4320 > th dose independent rect. 7 1
106 19.65 radiation 10.0 90 < th dose independent rect. 6 1
110 19.66 radiation 20.0 90 < th dose independent rect. 12 22
118 19.67 wind 1.0 10 > th dose independent rect. 4 4
121 19.67 radiation 10.0 10 > th dose independent rect. 7 8
122 19.67 wind 1.0 90 > th dose independent rect. 23 9
135 19.70 radiation 10.0 10 > th dose independent sin 2 NA
137 19.70 radiation 10.0 90 < th dose independent rect. 5 12
140 19.70 radiation 30.0 90 < th dose dependent rect. 12 22
146 19.71 radiation 10.0 270 < th dose dependent rect. 3 13
149 19.72 wind 3.0 43200 < th dose dependent rect. 24 5
173 19.73 atmosphere 1015.0 10 < th dose dependent rect. 6 14
196 19.76 radiation 10.0 10 < th dose independent sin 0 NA
207 19.77 radiation 10.0 90 > th dose independent sin 3 NA
213 19.78 wind 1.0 90 > th dose independent rect. 15 17
218 19.78 humidity 70.0 10 > th dose dependent rect. 6 8
227 19.79 atmosphere 1010.0 270 < th dose dependent rect. 3 18
229 19.80 humidity 80.0 10 > th dose independent sin 3 NA
247 19.81 temperature 20.0 10 > th dose independent rect. 6 14
254 19.82 radiation 10.0 270 > th dose independent sin 7 NA
255 19.82 humidity 80.0 10 < th dose independent rect. 7 8
257 19.82 temperature 15.0 270 > th dose independent rect. 21 10
260 19.82 atmosphere 995.0 270 > th dose dependent rect. 23 8
264 19.83 humidity 70.0 270 > th dose independent rect. 17 10
268 19.83 wind 3.0 43200 < th dose dependent rect. 4 1
280 19.84 wind 1.0 90 > th dose independent rect. 6 1
282 19.84 radiation 10.0 10 < th dose independent rect. 4 16
283 19.84 radiation 20.0 30 < th dose independent rect. 23 21
288 19.85 wind 3.0 43200 < th dose dependent rect. 2 1
316 19.86 radiation 10.0 270 < th dose dependent rect. 3 5
346 19.88 wind 1.0 90 > th dose dependent rect. 6 1
352 19.89 temperature 15.0 270 > th dose independent rect. 11 20
364 19.90 radiation 10.0 270 < th dose dependent sin 5 NA
407 19.93 temperature 15.0 10 > th dose independent rect. 15 17
410 19.93 radiation 10.0 10 < th dose independent rect. 23 23
425 19.94 humidity 50.0 270 > th dose dependent rect. 17 10
434 19.95 humidity 50.0 270 > th dose independent rect. 7 14
438 19.95 radiation 10.0 10 < th dose independent rect. 17 23
448 19.96 atmosphere 1000.0 90 > th dose independent rect. 6 1
467 19.96 radiation 10.0 10 < th dose independent rect. 21 23
474 19.96 radiation 30.0 10 < th dose dependent rect. 13 21
480 19.97 temperature 30.0 270 < th dose independent rect. 17 10
487 19.97 wind 1.0 90 > th dose independent rect. 12 20
497 19.97 radiation 10.0 270 < th dose dependent rect. 17 10
504 19.98 precipitation 0.1 10 < th dose independent rect. 20 10
507 19.98 radiation 10.0 10 < th dose independent rect. 6 23
515 19.98 humidity 50.0 10 > th dose dependent rect. 20 10
517 19.98 precipitation 0.1 10 < th dose dependent rect. 20 10
518 19.98 radiation 20.0 270 < th dose dependent rect. 21 11
523 19.99 wind 5.0 90 < th dose independent rect. 6 1
526 19.99 temperature 10.0 90 > th dose independent rect. 6 1
528 19.99 temperature 30.0 90 < th dose independent rect. 6 1
529 19.99 humidity 50.0 90 > th dose independent rect. 6 1
532 19.99 atmosphere 1015.0 90 < th dose independent rect. 6 1
559 19.99 humidity 50.0 90 > th dose independent rect. 7 23
561 19.99 radiation 20.0 10 < th dose dependent sin 1 NA
571 20.00 precipitation 0.1 90 < th dose independent rect. 6 1
590 20.00 precipitation 0.1 90 < th dose dependent rect. 6 1
608 20.01 wind 9.0 10 < th dose independent rect. 20 10
610 20.01 radiation 10.0 270 < th dose independent rect. 17 10
622 20.01 radiation 40.0 10 < th dose dependent rect. 20 10
630 20.02 atmosphere 1000.0 10 > th dose independent rect. 6 1
634 20.02 temperature 10.0 10 > th dose independent rect. 20 10
635 20.02 temperature 30.0 10 < th dose independent rect. 20 10
636 20.02 humidity 50.0 10 > th dose independent rect. 20 10
639 20.02 atmosphere 995.0 10 > th dose independent rect. 20 10
640 20.02 radiation 10.0 10 < th dose independent rect. 20 10
644 20.02 temperature 10.0 10 > th dose independent rect. 6 14
647 20.02 atmosphere 1015.0 10 < th dose independent rect. 6 14
648 20.02 precipitation 0.1 10 < th dose independent rect. 6 14
665 20.02 precipitation 0.1 10 < th dose dependent rect. 6 14
670 20.03 temperature 10.0 1440 > th dose independent rect. 21 9
673 20.03 temperature 30.0 1440 < th dose independent rect. 21 9
677 20.03 humidity 50.0 1440 > th dose independent rect. 21 9
683 20.03 atmosphere 995.0 1440 > th dose independent rect. 21 9
685 20.03 radiation 20.0 1440 < th dose independent rect. 21 9
698 20.03 atmosphere 995.0 10 > th dose independent rect. 6 14
700 20.03 temperature 10.0 1440 > th dose independent rect. 6 15
717 20.03 atmosphere 995.0 90 > th dose dependent rect. 6 1
734 20.04 radiation 10.0 90 < th dose independent sin 2 NA
735 20.04 radiation 10.0 270 < th dose independent rect. 3 4
753 20.04 radiation 40.0 90 < th dose dependent rect. 23 11
756 20.04 radiation 40.0 10 < th dose dependent rect. 13 19
758 20.05 radiation 10.0 10 > th dose independent no NA NA
760 20.05 radiation 1.0 10 > th dose independent rect. 6 1
763 20.05 radiation 10.0 270 > th dose independent rect. 6 6
858 20.05 temperature 30.0 10 < th dose dependent rect. 6 1
873 20.05 atmosphere 1000.0 30 > th dose dependent rect. 8 20
878 20.06 wind 5.0 10 < th dose independent rect. 6 1
881 20.06 temperature 10.0 10 > th dose independent rect. 6 1
883 20.06 temperature 30.0 10 < th dose independent rect. 6 1
884 20.06 humidity 50.0 10 > th dose independent rect. 6 1
888 20.06 atmosphere 1015.0 10 < th dose independent rect. 6 1
892 20.06 precipitation 0.1 10 < th dose independent rect. 6 1
902 20.06 wind 9.0 10 < th dose independent rect. 6 14
904 20.06 humidity 50.0 270 > th dose independent rect. 7 20
908 20.06 wind 9.0 10 < th dose dependent rect. 6 1
909 20.06 precipitation 0.1 10 < th dose dependent rect. 6 1
925 20.07 humidity 80.0 10 < th dose independent sin 3 NA
937 20.07 temperature 15.0 90 > th dose independent rect. 23 10
944 20.07 temperature 20.0 10 > th dose independent rect. 4 16
956 20.07 wind 9.0 90 < th dose dependent rect. 6 1
957 20.07 temperature 30.0 90 < th dose dependent rect. 6 1
958 20.07 wind 1.0 43200 > th dose dependent rect. 24 4
997 20.08 wind 1.0 43200 > th dose independent rect. 23 6